Gene Rru_A1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1401 
Symbol 
ID3834816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1653542 
End bp1655251 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content64% 
IMG OID637825491 
Productchemotaxis sensory transducer 
Protein accessionYP_426489 
Protein GI83592737 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTT CGATCAAGTT GAAGCTCGGA CTGACCTTCG CCGTCATCAT CGCCCTGTCA 
ATGGTCACGG CGGGCCTGGG GGTCACCAGC CTTGCCGGGC TTGAGGCCAA TCTGCGTGGC
TTGGTTGATG GGCCGGTCCA GCGTCTGCAA ACGGCGGAAA AGCTGCTGGT CGATGTTCTT
CAGGTCATTC GCGCCCAGAA GAACATGATC CTCGCCGTCT CGCCCCAGGA GGCCGCTCAA
CACGAGAAGA CCATCCTGGG CCTGCGGCCG CAGATCACCA ACATCCTCGA TCAGGCGGTG
AGCGCCGCCA CCCCCGAAGG CAAGCCGAAA TGGGAAGCCT TTCGCGTGGC CTGGGGGGAA
TTCGCGCTGT TCGACGAAAA GGTCCGCGGC TTCGTCCGCG CCGGCGAACC CTTGAAAGCC
CAGGAACTCT CGGTCAGCGA GGGTCGCCAG ATCGTTGGCG ATGTCGAAAA GCAAAATATG
GATCTGGTCG ACCTGAACCA GACCCAGATG GAGCAGGCCC AGGCGGACGC GACGGCCCAG
TATGAAAGCT CCCGTACCTT TCTGCTGTCG ACCATCCTCG TTTCCTTGAT CATCGCCGTT
GGCGCCGGAC TGTGGATTTC CCTGGGGATC AGCCGTGGTT TGGGCCGGGC TGGTAGCCTA
GCCCAGGAGG TCGCCGGGGG CGATCTGACC AAGACCATCG ATAACGTGCC GCGCGACGAA
GTCGGTGATC TGATCGGCCA TATCAACGCC ATGGTGAAGA AACTGCGCGA GGTGGTCGGC
GAGGCCAATA GCGCCGCCGA GAACGTGTCC TCGGGCAGTC AGGAATTGTC GGCGACGGCC
GAGGAATTGT CACAGGGCGC CACCGAACAG GCGTCCTCGG CCGAAGAGGC CTCGGCCTCG
ATGGAGCAGA TGGCGGCCAA TATCAAGCAG AACGCCGATA ACGCCAGCCA GACCGAGAAG
ATCGCCCGCC AATCCTCGCT CGATGCCCAG GCCAGCGGCG AGGCGGTGAC CCGCGCCGTG
GTGGCGATGC AGACGATCGC CGAGAAGATC ACCATCGTTC AAGAGATCGC CCGCCAGACC
GATCTGCTGG CGCTCAACGC CGCCGTCGAG GCGGCAAGGG CCGGCGAGCA TGGGCGCGGT
TTCGCCGTCG TCGCTTCGGA AGTGCGCAAG CTGGCCGAAC GCAGTCAGCT GGCGGCGGCC
GAGATTAGCA CCATGTCGTC GCAAACCGTG CGCGCTGCCC AGGAGGCCGG AGATATGCTT
GGCCGGTTGG TGCCCGATAT CAGAAAAACC GCCGAATTGG TTTCCGAGAT CAGCGCCGCC
TGCCGCGAGC AGGATATCGG CGGCGATCAG ATCAATCAGG CGATCCAACA ACTTGACAAG
GTGACCCAGC AGAACGCCAG CGCCTCGGAG GAAATGTCGG CGACCTCGGA GGAACTGGCC
GCCCAGTCCG AACAGCTTCA GGCCAGCATC TCCTACTTCC GCGTCGACGA GGGCAACGGA
GGGACCCGCG CCATGCCGTC GCGACGGCTG TCCCGTCCCG TCGGCACCGC CCTGGTCAAA
AAGCCGGTGG CGCGCGGCGG GCGGGTCGCC CTCGGCAACC CCGCCGCCGG GCGCAATGGC
GCCAAGCGCA ATGGGGCCGA CACCGGCTTC ACCCTTGATC TCGCCCAGGG CGGAAGCGAC
GCCCAAGACG TTGAATTCGA GAAGTATTGA
 
Protein sequence
MRISIKLKLG LTFAVIIALS MVTAGLGVTS LAGLEANLRG LVDGPVQRLQ TAEKLLVDVL 
QVIRAQKNMI LAVSPQEAAQ HEKTILGLRP QITNILDQAV SAATPEGKPK WEAFRVAWGE
FALFDEKVRG FVRAGEPLKA QELSVSEGRQ IVGDVEKQNM DLVDLNQTQM EQAQADATAQ
YESSRTFLLS TILVSLIIAV GAGLWISLGI SRGLGRAGSL AQEVAGGDLT KTIDNVPRDE
VGDLIGHINA MVKKLREVVG EANSAAENVS SGSQELSATA EELSQGATEQ ASSAEEASAS
MEQMAANIKQ NADNASQTEK IARQSSLDAQ ASGEAVTRAV VAMQTIAEKI TIVQEIARQT
DLLALNAAVE AARAGEHGRG FAVVASEVRK LAERSQLAAA EISTMSSQTV RAAQEAGDML
GRLVPDIRKT AELVSEISAA CREQDIGGDQ INQAIQQLDK VTQQNASASE EMSATSEELA
AQSEQLQASI SYFRVDEGNG GTRAMPSRRL SRPVGTALVK KPVARGGRVA LGNPAAGRNG
AKRNGADTGF TLDLAQGGSD AQDVEFEKY