Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4674 |
Symbol | |
ID | 3972360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5232269 |
End bp | 5234473 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927786 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_534515 |
Protein GI | 90426145 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCA CTGTGAAGGC CAAGCTGGCA AGTGCGTTCG GTGTCGTCAT TGCGCTGTCG ATGGTTACGG GCTTCATCGC CTACAGCAAG CTTACCTTGC TGGATACCTC GCAGCTGCGG CTGGTGGCGC AGGCGGAACG CATGAAGAAG ACCGCGAACC TGATGAACAG CATTCAGGGC CAGCTTCGCG CCGAAACTCG GATGATCCTC TCGCTTTCGG ACAAGGATTC CGCCGAACAG CAAAAGCTGA TGATGGAGCG GCGCGACGCT AGCCTGAAGC TCAAGGACGG CATTTACGGC GCTGCGTCCG AAGCCGGAAA ACGGCTGATC GATCAGGCCG CGGTGAAGTT GCAGCGGCTG AACGAGTTGC AGGAACAGGT CGGCAAACTT TCGCAACTGC GGTCGGACAC TCGTTCCGCG GAGTTGTGGG CCTCCGAAGG ACTGCCGACG CTTCGCGAAT TCAACACGGC GGTCGACAAT GCCGTCGCCG AAATCGGCAA GGCGCAACCG ACGCTGGAGG GGCAGCGCGC GATCACCTCG TTGCAGACCT CGAAATATGA AGCCGCTCGG CTTGCGCGCT TCGCGACCAC CACCTTCGGT GCCAGTACGA TCGACGAACT CGATGCCGAA TACAAAGCCA CGCAGCCGGT GAAAGTCGCC TTCAAGGCCG GCGTGACTCA GACCTCGACC CAACTTGCGG CGCTCGGAGT CGCTTCCAGC GCGCTCAATG CGCAGGCCGA TCGCTTTGTG CGCTCCGCCG AGAAAGTCAT CGATACCGCG CATGAGGGCG GCAAGATCAA GGCGGTCGCG ATCACCAATA ATGAGGGCCG CAAGGCGTTC AATGAAGCCC AGACGGCACT CGAAGCGTAC ATCAAGCTCA CCGACGACCA GATGGGCGAG CTTGCCGCCT CCGGCTCGGA AGAAGCGAGC GTCGCCAAGA CGCTGCTGAT CGGCATCATC ATCGCCTCGC TGCTGGCCGC AATCGCCTCG GCGACGTGGA TCGCTGTCAA CATCAGCCGT GGCCTCAGCC GCGCGGTCGG TCTCGCCGAC GCGGTCGCGA TCGGCGATCT CAGCCAGCGG ATCGAGGTTT CCAGCAACGA CGAGATCGGC GATCTGGTGA AATCGCTCAA CAGCATGACG GTGAACCTCA ACGCCACCGC GAACATCGCG GATTCGATCG CATCCGGCGA TCTCACCGTC AACGCCAAGC CGCAGTCCGC AAAGGACACG CTTGGCATCG CGCTGGAACG CATGGTCGAG AAGCTGCGGA ACGTGGTCAC CGACGCGGTC ACCGCGGCAC AGAACGTCTC CGCCGGCAGC CAGGAATTGT CGGCCAGCGC CGAGCAGCTG TCGCAGGGCG CCACCGAGCA GGCCTCGGCC GCCGAAGAAG CGTCGTCCTC GATGGAAGAG ATGGCGGCGA ATGTGAAGCA GAACGCCGAG AACGCCGGTC AGACCGAGAA GATCGCGCAT CAGTCGGCCA AGGACGCCGA GGCCAGTGGG GCCGCGGTCG GCCGCGCCGT CGAAGCGATG CAGACCATCG CCGGCAAGAT CACCATCGTG CAGGAGATCG CCCGGCAGAC CGATCTGTTG GCGCTGAACG CCGCGGTGGA AGCTGCGCGC GCCGGCGAAC ACGGCAAGGG CTTCGCGGTG GTGGCTTCGG AAGTGCGCAA GCTCGCCGAA CGCAGCCAGA CCGCGGCCGC CGAAATCGGC GCGCTGTCGA GCGAGACCGT CAAGGCGGCG CAGGAAGCCG GCTCGATGCT GTCGCGGCTG GTGCCGGACA TCAAGAAGAC CGCGCAATTG GTCGAAGAGA TCACCGCCGC CTGCCGCGAG CAGGACGTCG GATCGTCGCA GATCAACCAG GCGATCCAGC AGCTCGACAA GGTCGGCCAG CAGAACGCCG CGGCCTCCGA ACAGGTGTCC TCGACCTCCG AAGAACTCGC CTCACAGGCC GAACAGCTGC AATCGACCAT CGCCTACTTC AAGATCAACC GTCCGAAGGA CGGCGAACAG CCCGCGGCGC TCGATAAGGC GGTGGCCCAG CTGCGCAACA AGTCCGCGGC GATGGCGTCG TCGTCCCGCG GAGCCAAGAG CGCAGCTACG CGCCCGGCGC GCGCGCTGAA GGCCGCCGGC GGCGGCGGCT TTGCCCTCGA GATGAGCGAC GCGGCCGATG ATCGCGACGA CGAGTTTCAT CGCCGAAATG CCTGA
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Protein sequence | MRFTVKAKLA SAFGVVIALS MVTGFIAYSK LTLLDTSQLR LVAQAERMKK TANLMNSIQG QLRAETRMIL SLSDKDSAEQ QKLMMERRDA SLKLKDGIYG AASEAGKRLI DQAAVKLQRL NELQEQVGKL SQLRSDTRSA ELWASEGLPT LREFNTAVDN AVAEIGKAQP TLEGQRAITS LQTSKYEAAR LARFATTTFG ASTIDELDAE YKATQPVKVA FKAGVTQTST QLAALGVASS ALNAQADRFV RSAEKVIDTA HEGGKIKAVA ITNNEGRKAF NEAQTALEAY IKLTDDQMGE LAASGSEEAS VAKTLLIGII IASLLAAIAS ATWIAVNISR GLSRAVGLAD AVAIGDLSQR IEVSSNDEIG DLVKSLNSMT VNLNATANIA DSIASGDLTV NAKPQSAKDT LGIALERMVE KLRNVVTDAV TAAQNVSAGS QELSASAEQL SQGATEQASA AEEASSSMEE MAANVKQNAE NAGQTEKIAH QSAKDAEASG AAVGRAVEAM QTIAGKITIV QEIARQTDLL ALNAAVEAAR AGEHGKGFAV VASEVRKLAE RSQTAAAEIG ALSSETVKAA QEAGSMLSRL VPDIKKTAQL VEEITAACRE QDVGSSQINQ AIQQLDKVGQ QNAAASEQVS STSEELASQA EQLQSTIAYF KINRPKDGEQ PAALDKAVAQ LRNKSAAMAS SSRGAKSAAT RPARALKAAG GGGFALEMSD AADDRDDEFH RRNA
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