More than 300 homologs were found in PanDaTox collection
for query gene RPC_4672 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  57.84 
 
 
738 aa  738    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  75.07 
 
 
691 aa  960    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  100 
 
 
693 aa  1368    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  64.39 
 
 
734 aa  818    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
733 aa  628  1e-178  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  52.86 
 
 
702 aa  611  1e-173  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  83.91 
 
 
640 aa  517  1.0000000000000001e-145  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  71.53 
 
 
566 aa  498  1e-139  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  64.09 
 
 
609 aa  483  1e-135  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
747 aa  468  9.999999999999999e-131  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
705 aa  457  1e-127  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  72.73 
 
 
650 aa  431  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  58.48 
 
 
560 aa  421  1e-116  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  52.66 
 
 
611 aa  417  9.999999999999999e-116  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  57.83 
 
 
569 aa  410  1e-113  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  58.28 
 
 
564 aa  410  1e-113  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  54.26 
 
 
569 aa  411  1e-113  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  53.46 
 
 
569 aa  401  9.999999999999999e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  66.28 
 
 
640 aa  384  1e-105  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  58.31 
 
 
602 aa  381  1e-104  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  65.34 
 
 
640 aa  379  1e-103  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  53.36 
 
 
599 aa  377  1e-103  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  63.71 
 
 
774 aa  375  1e-102  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  61.84 
 
 
637 aa  367  1e-100  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  53.47 
 
 
606 aa  369  1e-100  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  52.34 
 
 
602 aa  365  1e-99  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  52.76 
 
 
677 aa  353  5.9999999999999994e-96  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
676 aa  351  2e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  54.59 
 
 
554 aa  351  3e-95  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  55.35 
 
 
563 aa  345  2e-93  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
566 aa  345  2e-93  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
558 aa  345  2e-93  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  52.62 
 
 
552 aa  344  2.9999999999999997e-93  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  50.75 
 
 
551 aa  340  5.9999999999999996e-92  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  64.79 
 
 
642 aa  339  8e-92  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  48.99 
 
 
576 aa  339  9e-92  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  49.78 
 
 
581 aa  338  1.9999999999999998e-91  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  54.81 
 
 
566 aa  337  3.9999999999999995e-91  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
553 aa  336  7e-91  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  59.83 
 
 
619 aa  336  7.999999999999999e-91  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  46.62 
 
 
560 aa  335  1e-90  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  46.62 
 
 
560 aa  335  1e-90  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  45.95 
 
 
553 aa  335  2e-90  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  51.4 
 
 
563 aa  334  3e-90  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  49.36 
 
 
568 aa  332  2e-89  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  51.94 
 
 
597 aa  328  2.0000000000000001e-88  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  58.52 
 
 
494 aa  324  4e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  48.29 
 
 
561 aa  323  5e-87  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
561 aa  323  9.000000000000001e-87  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  55.13 
 
 
534 aa  322  1.9999999999999998e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  54.81 
 
 
534 aa  320  5e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  59.6 
 
 
659 aa  316  8e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  61.59 
 
 
554 aa  313  6.999999999999999e-84  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  56.03 
 
 
1500 aa  311  2e-83  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  49.44 
 
 
568 aa  308  3e-82  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  58.26 
 
 
686 aa  308  3e-82  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  51.42 
 
 
546 aa  307  4.0000000000000004e-82  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  51.34 
 
 
547 aa  307  4.0000000000000004e-82  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
690 aa  306  7e-82  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
735 aa  306  7e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  45.94 
 
 
727 aa  306  8.000000000000001e-82  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  52.04 
 
 
548 aa  306  9.000000000000001e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
735 aa  306  9.000000000000001e-82  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  50 
 
 
562 aa  304  3.0000000000000004e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  55.28 
 
 
1089 aa  303  7.000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  44.42 
 
 
551 aa  300  4e-80  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
617 aa  300  6e-80  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
969 aa  298  2e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  55.41 
 
 
720 aa  298  2e-79  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
553 aa  298  2e-79  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
621 aa  298  3e-79  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
740 aa  298  3e-79  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  54.89 
 
 
1093 aa  296  6e-79  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.93 
 
 
1088 aa  295  1e-78  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  52.01 
 
 
675 aa  295  2e-78  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
727 aa  294  4e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.52 
 
 
1046 aa  291  2e-77  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  50 
 
 
674 aa  290  5.0000000000000004e-77  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  52.91 
 
 
868 aa  289  9e-77  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  60.59 
 
 
652 aa  289  9e-77  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  54.49 
 
 
962 aa  288  2e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  60.65 
 
 
823 aa  287  4e-76  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
608 aa  286  5.999999999999999e-76  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  49.86 
 
 
544 aa  285  2.0000000000000002e-75  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  52 
 
 
780 aa  284  3.0000000000000004e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  43.99 
 
 
550 aa  284  5.000000000000001e-75  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
547 aa  282  1e-74  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  55.15 
 
 
1049 aa  281  2e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  57.29 
 
 
846 aa  281  4e-74  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  47.91 
 
 
543 aa  278  3e-73  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  53.85 
 
 
1048 aa  278  4e-73  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
561 aa  277  5e-73  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  52.86 
 
 
780 aa  277  5e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
551 aa  276  6e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  49.26 
 
 
559 aa  277  6e-73  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  44.44 
 
 
541 aa  276  7e-73  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
550 aa  275  3e-72  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  47.74 
 
 
551 aa  274  4.0000000000000004e-72  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  39.26 
 
 
551 aa  274  5.000000000000001e-72  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  43.78 
 
 
553 aa  273  6e-72  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
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