More than 300 homologs were found in PanDaTox collection
for query gene Gbem_3298 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  89.71 
 
 
554 aa  890    Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  100 
 
 
553 aa  1108    Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  81.72 
 
 
548 aa  508  9.999999999999999e-143  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  58.14 
 
 
546 aa  503  1e-141  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  51.45 
 
 
576 aa  446  1.0000000000000001e-124  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
566 aa  447  1.0000000000000001e-124  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  50.69 
 
 
563 aa  423  1e-117  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  49.75 
 
 
581 aa  414  1e-114  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  49.57 
 
 
568 aa  400  9.999999999999999e-111  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  60.28 
 
 
558 aa  400  9.999999999999999e-111  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  63.2 
 
 
566 aa  398  1e-109  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  64.88 
 
 
563 aa  393  1e-108  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  68.56 
 
 
677 aa  389  1e-107  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  70.9 
 
 
494 aa  388  1e-106  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
559 aa  383  1e-105  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  60.73 
 
 
676 aa  384  1e-105  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
617 aa  376  1e-103  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
554 aa  376  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
621 aa  373  1e-102  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
557 aa  369  1e-101  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  61.78 
 
 
1500 aa  370  1e-101  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
735 aa  369  1e-101  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  64.18 
 
 
735 aa  371  1e-101  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
556 aa  366  1e-100  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  58.73 
 
 
597 aa  365  1e-99  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
608 aa  364  2e-99  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  63.38 
 
 
1093 aa  363  3e-99  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  61.58 
 
 
568 aa  362  1e-98  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  63.91 
 
 
686 aa  362  1e-98  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
969 aa  356  7.999999999999999e-97  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.84 
 
 
1046 aa  353  5e-96  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  66.56 
 
 
780 aa  349  7e-95  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
550 aa  349  8e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  57.53 
 
 
690 aa  348  1e-94  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  72.14 
 
 
962 aa  345  1e-93  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  62.36 
 
 
780 aa  344  2e-93  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  63.82 
 
 
727 aa  343  5e-93  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  69.82 
 
 
733 aa  342  7e-93  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  60.9 
 
 
868 aa  341  2e-92  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  59.03 
 
 
705 aa  340  2.9999999999999998e-92  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  49.32 
 
 
675 aa  340  4e-92  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  44.62 
 
 
569 aa  339  8e-92  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  59.01 
 
 
846 aa  339  9e-92  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.27 
 
 
1088 aa  338  1.9999999999999998e-91  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  66.45 
 
 
1048 aa  338  1.9999999999999998e-91  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  64.4 
 
 
1049 aa  337  2.9999999999999997e-91  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  47.82 
 
 
659 aa  335  1e-90  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  42.11 
 
 
541 aa  335  2e-90  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  65.47 
 
 
652 aa  335  2e-90  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  64.58 
 
 
1089 aa  334  2e-90  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
823 aa  330  3e-89  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  46.37 
 
 
566 aa  330  3e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  42.99 
 
 
564 aa  330  3e-89  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  41.97 
 
 
551 aa  330  5.0000000000000004e-89  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
547 aa  330  6e-89  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  69.45 
 
 
685 aa  328  1.0000000000000001e-88  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  57.33 
 
 
674 aa  329  1.0000000000000001e-88  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  46.23 
 
 
560 aa  326  6e-88  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  56.18 
 
 
559 aa  325  1e-87  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  54.35 
 
 
720 aa  324  3e-87  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  44.23 
 
 
569 aa  324  3e-87  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
569 aa  323  4e-87  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  73.55 
 
 
740 aa  323  5e-87  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  53.01 
 
 
727 aa  323  6e-87  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  43.33 
 
 
551 aa  322  8e-87  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  59.55 
 
 
691 aa  322  9.999999999999999e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  54.4 
 
 
553 aa  322  9.999999999999999e-87  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  51.2 
 
 
551 aa  321  1.9999999999999998e-86  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  42.26 
 
 
543 aa  322  1.9999999999999998e-86  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
551 aa  321  1.9999999999999998e-86  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
550 aa  320  3e-86  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  54.21 
 
 
553 aa  320  3.9999999999999996e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  55.25 
 
 
637 aa  320  3.9999999999999996e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  41.31 
 
 
611 aa  319  7.999999999999999e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  44.49 
 
 
682 aa  319  7.999999999999999e-86  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  51.25 
 
 
551 aa  318  2e-85  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
553 aa  315  9.999999999999999e-85  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  40.79 
 
 
606 aa  315  1.9999999999999998e-84  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
693 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  53.12 
 
 
552 aa  314  1.9999999999999998e-84  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
553 aa  314  2.9999999999999996e-84  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0872  methyl-accepting chemotaxis sensory transducer  51.05 
 
 
685 aa  313  6.999999999999999e-84  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  42.37 
 
 
609 aa  312  9e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
553 aa  312  1e-83  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  61.86 
 
 
640 aa  311  2.9999999999999997e-83  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  48.45 
 
 
561 aa  310  5e-83  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  52.28 
 
 
561 aa  310  5e-83  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  48.2 
 
 
561 aa  309  8e-83  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  56.29 
 
 
733 aa  308  2.0000000000000002e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  50.43 
 
 
562 aa  308  2.0000000000000002e-82  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  59.56 
 
 
774 aa  306  6e-82  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  65.34 
 
 
640 aa  305  1.0000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  50.37 
 
 
702 aa  304  2.0000000000000002e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  51.99 
 
 
551 aa  304  3.0000000000000004e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_011146  Gbem_1826  methyl-accepting chemotaxis sensory transducer  56.65 
 
 
835 aa  304  3.0000000000000004e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  41.82 
 
 
602 aa  304  3.0000000000000004e-81  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  42.95 
 
 
602 aa  303  5.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  63.99 
 
 
738 aa  303  6.000000000000001e-81  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  53.77 
 
 
509 aa  301  1e-80  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  64.13 
 
 
734 aa  301  2e-80  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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