| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0142 |
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| Symbol | |
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| ID | 6407785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 157985 |
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| End bp | 160186 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710051 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001989180 |
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| Protein GI | 192288575 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTAA CTGTTAAAGC AAAGCTGGCC GGCGCCTTTG GTGTCGTGAT CCTGCTGTCC
GCCATCACCG GCGGAATCGC CTACGTCAAG CTGACGCAAC TGGCTGAGAC CTCGGAAGGC
CTGGTGTCGC GCTCGCAGCG GATCGATAAG GCCGGCGAAC TGCAGAACAA CATTCTGTAC
CAGACCCGCG CCCAGCGCGA CATCATCATC GCGTCGACCG AAGCGGAGCT GCAGAAGGTC
GCCGACGAGG TGAAGCAGTA TCGCAAGGAT GCTCTTCGTA TCCGCGACGA GATCGCTGCA
GTTGCCACCG AGGCCGGCAA GCGGATGATC GAGAAGTTTT CGACCGCGTA CGACAAAATG
AACGCGACCG AAGACCAGAT CATCAAGTTC GGTACGCTCA ACTCCAACAA TCGCGGTGCT
CAACTTTGGA CCAGTGAAGG TGCGCCGGTC GTCAAGGATT GGAGCGAGGC GGTCGACAGC
TCGCTGGCGG AAGCGCGCAA GCTGCCGGTG TCGGCCGAGC GTGCGAACGC GCTGATCTCG
ATCCTGTCGA TTCGCGCGGA TGGTGAGGCG GTCCAGAAGG ATCTGGCGCT GTCGTTCTAT
GCGTCGAACC TCGAAGACCT CTCCTCCACC ATCAAGGCGC TTGGTGACGC CACCGAGCGT
CTGCGGTCGA GCTCGCAGCA GAGCGTTGCG GCGTTGTCGG CCGTCGGCCT GTCGTCGTCG
GCCATCACCA GCCAGTCCGA ACGCTTCGCC AAGATCGCCG GCCGCGTGTC CGACATCGTC
AAGGAAGGCG GCAACATTCG CGCCGCGGCG CTGGCCGGGA CCGAAGGCCG GGCGACCTCG
ATGGCCGCGA TCCAGGCTGC GACCGACTAC GTCAACTACG TCAAGAAGGC GATGGCCGAG
ATGAGCGAGC AGGCGGCGTC CGACGCTGCC AACGCCAAGC TGCTGCTGAT CAGCATCGTG
ATCGCGTCTC TGCTGGCGGC CGTCGCTTCC GCGCTCTGGA TCGCCATCAA CATCAGCCGG
GGCCTGGCGC AGGCGGTGGA GCTCGCCAAT GCGGTTGCGA TCGGCGATCT CAGCCACAAG
ATCAATTCCA CGAGCGATGA CGAAGTCGGC GATCTGGTGA AGTCGCTGAA CGCGATGACC
GCCAACCTCA ATGCGACCGC CGGCGTCGCC GACGAGATCG CCCGCGGCAA CCTCACGATC
GAGGCCAAGC GGCTGTCGGA GAAGGACACC CTGGGCATCG CGCTGGAGCA GATGGTCGAG
AAGCTGCGCC AGATCGTGTC GGAAGCGCTC ACTGCGGCTC AGAACGTCTC CGCGGGCAGC
CAGGAACTGT CGGCCAGCGC CGAGCAGCTG TCGCAGGGCG CCACCGAGCA GGCATCGTCG
GCCGAAGAAG CTTCGTCGTC GATGGAAGAG ATGGCGGCGA ACATCAAGCA GAATGCCGAG
AACGCCAGCC AGACCGAAAA GATCGCCGCG CAGTCCGCCA AGGATGCCGA AGCCAGCGGC
ACCGCCGTGG GTCGTGCGGT TCAGGCGATG CAGACGATCG CCGAGAAGAT CACCATCGTG
CAGGAGATCG CTCGTCAGAC CGACCTTCTG GCGCTCAACG CCGCGGTCGA AGCCGCCCGC
GCCGGCGAAC ACGGCAAGGG CTTCGCGGTG GTCGCTTCGG AAGTCCGCAA GCTCGCCGAA
CGCAGCCAGG CGTCGGCGAC CGAAATCGGC GAACTGTCCG GCGAGACCGT GAAGGTCGCG
CAGGAAGCCG GCGAGATGCT CGCCAAGCTG GTGCCGGACA TTAAGAAGAC CTCCGAACTG
GTGCAGGAGA TCTCCTCGGC CTGCCGCGAA CAGGACGTCG GTTCGTCGCA GATCAACCAG
GCGATCCAGC AGCTCGACAA GGTCGGCCAG CAGAACGCCA GCGCCTCCGA GCAGGTCTCT
TCGACCTCGG AAGAACTCGC TTCGCAGGCC GAGCAGCTGC AGTCGACCAT CGCGTTCTTC
CGCATCGACC AGGACAAGGC GAAGGCGCAC GGCGCGCCGA TCGACAAGGC CGTCAACCAG
CTCCGTGCCA AGGCCGCTCA CATGGCTTCG GTCGACCGTA GCAACAAGAA GCCGCAGGCC
GCCAAGCCGC AGCGCCAGCT GAAGGCCGCG GGTGGCGGCG GTGGCTTCGC CTTCGCGCTC
GGTGACGGCG AAGACGATCG CGACGCTGAC TTCCAGCGCT GA
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| Protein sequence | MRLTVKAKLA GAFGVVILLS AITGGIAYVK LTQLAETSEG LVSRSQRIDK AGELQNNILY
QTRAQRDIII ASTEAELQKV ADEVKQYRKD ALRIRDEIAA VATEAGKRMI EKFSTAYDKM
NATEDQIIKF GTLNSNNRGA QLWTSEGAPV VKDWSEAVDS SLAEARKLPV SAERANALIS
ILSIRADGEA VQKDLALSFY ASNLEDLSST IKALGDATER LRSSSQQSVA ALSAVGLSSS
AITSQSERFA KIAGRVSDIV KEGGNIRAAA LAGTEGRATS MAAIQAATDY VNYVKKAMAE
MSEQAASDAA NAKLLLISIV IASLLAAVAS ALWIAINISR GLAQAVELAN AVAIGDLSHK
INSTSDDEVG DLVKSLNAMT ANLNATAGVA DEIARGNLTI EAKRLSEKDT LGIALEQMVE
KLRQIVSEAL TAAQNVSAGS QELSASAEQL SQGATEQASS AEEASSSMEE MAANIKQNAE
NASQTEKIAA QSAKDAEASG TAVGRAVQAM QTIAEKITIV QEIARQTDLL ALNAAVEAAR
AGEHGKGFAV VASEVRKLAE RSQASATEIG ELSGETVKVA QEAGEMLAKL VPDIKKTSEL
VQEISSACRE QDVGSSQINQ AIQQLDKVGQ QNASASEQVS STSEELASQA EQLQSTIAFF
RIDQDKAKAH GAPIDKAVNQ LRAKAAHMAS VDRSNKKPQA AKPQRQLKAA GGGGGFAFAL
GDGEDDRDAD FQR
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