| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4314 |
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| Symbol | |
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| ID | 7386555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3629016 |
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| End bp | 3630710 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652971 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002551142 |
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| Protein GI | 222150185 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.77703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTTA CAATCAAAAT GAAGCTGGGG TTGGCTTTCG GCATCGTCGT CGCGTTGCTG
ATTGCCAGTT CGGTTCTCGG AATTCAAAGT CTGGGCTCGA TGAACGATGC CATGGGCAAT
ACGCTTGAAG GTCCTGTGGA ACGGTTGCGC TTGGCTCAAC AGCTCCAGAT GGAGCAACTT
CAGCAATTGC GTCAGCAAAA GAATGTTCAG CTGGCGCAAT CCGAGGACGA AATAAAATCC
AGTATCGTCA AGGCCAATGC GTCGCGTGCC GAATTCGACC AGGCTTTTGC AGCCGTGATG
GCCAAGGCGA CGGAAGAAGG CAAGGTATTC TGGAACAAGC TTGCCGTCGT GGAAGCCGAC
TTCCGAAAGA CCGACGACCA GATCAAGGCT TTGACAATCG CTGGCGATAC TGCGGGCGCA
CTGAGAGTCT CGACGGGTGA AAACCGCAAG GCTGTCAATG AAATCGACGA TCTCCTGTCG
CAAGTCGTCA GCCTGGAACA GTCCCGCCTG CGCGATGCTG ACGCTGCCGG CGATGCCGAA
TATGCCAGCA CCCGGTTGAT GCTTTTGTCC CTGTCGATTG CCGCCTCCGT TATTGCCGTT
ATGGCAGCGG TCTGGATTGT CATCAGCGTC ACCGGCGGTA TCAATCGTGC GGTTGTGGCT
GTGCGCAAGG TTGCCGATGG CGACCTGACG GAGTTTGCCC AAATCCGCTC ACGCGATGAA
ATCGGTGACA TGCTGCAATA TGTCAACACG ATGATCGAGC GTCTTCGCGG CGTGGTTGGC
GATGCGCTGT CAGCATCCGA CAATGTGTCT TCGGGTAGCC AGCAGCTATC GTCTGCCTCC
GAGCAGGTCA GCCAGGGCGC AACGGAACAG GCGTCATCTG CCGAAGAAGC TTCTGCCTCG
ATGGAAGAGA TGGCGGCCAA TATCAAGCAG AATGCTGACA ATGCGGCCCA GACTGAAAAG
ATCGCCCGCC AGTCCTCCAA GGATGCAGAA ACCTCTGGCG AAGCGGTCAA CCGTGCGGTT
GGTGCGATGC GCACGATTGC CGAGAAGATC TCGATCGTCC AGGAAATCGC TCGTCAGACC
GATCTTCTGG CCTTGAATGC GGCGGTTGAA GCCGCCCGTG CGGGTGAGCA TGGCAAGGGC
TTTGCAGTAG TTGCCTCTGA AGTGCGCAAG CTTGCCGAAC GCAGCCAGGC AGCAGCGGCT
GAAATCAGCA CGCTATCGGG CCAGACGGTA CAGGTGGCAA CGGAAGCCGG AGAAATGCTG
ACCCGGTTGG TTCCTGACAT CCGCAAGACG GCGGAATTGA TTTCCGAGAT CTCGGCGGCT
TGCCGTGAGC AAGATATCGG TGCCAGCCAG ATCAACGAGG CGATCCAGCA GCTCGACAAG
GTGACGCAGC AGAATGCGGG CGCTTCGGAA GAAATGTCTG CAACCTCTGA AGAACTGGCT
GCTCAGGCCG AGGAACTGCA AACCTCCATC GCCTTCTTCA AGGTCGATGG TGCGCATCAG
AAGAAGCCTG CACCACAGAC CCGGACTGTT GCTGCTCGTG CTGCGCCAGC CCGGACGGCT
GCACCGGCAA AACCCCGTAC ACCGACGTCG TCTCAGACGG TTGCTGCCCA GCAGGCGAGA
GCCAAGGGCT TTGCCCTCGA TCTCTCCATG GGCGGTCCGG ATGAGGAGGA TCTGGATTTT
CGTCAGTCGG CATGA
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| Protein sequence | MRFTIKMKLG LAFGIVVALL IASSVLGIQS LGSMNDAMGN TLEGPVERLR LAQQLQMEQL
QQLRQQKNVQ LAQSEDEIKS SIVKANASRA EFDQAFAAVM AKATEEGKVF WNKLAVVEAD
FRKTDDQIKA LTIAGDTAGA LRVSTGENRK AVNEIDDLLS QVVSLEQSRL RDADAAGDAE
YASTRLMLLS LSIAASVIAV MAAVWIVISV TGGINRAVVA VRKVADGDLT EFAQIRSRDE
IGDMLQYVNT MIERLRGVVG DALSASDNVS SGSQQLSSAS EQVSQGATEQ ASSAEEASAS
MEEMAANIKQ NADNAAQTEK IARQSSKDAE TSGEAVNRAV GAMRTIAEKI SIVQEIARQT
DLLALNAAVE AARAGEHGKG FAVVASEVRK LAERSQAAAA EISTLSGQTV QVATEAGEML
TRLVPDIRKT AELISEISAA CREQDIGASQ INEAIQQLDK VTQQNAGASE EMSATSEELA
AQAEELQTSI AFFKVDGAHQ KKPAPQTRTV AARAAPARTA APAKPRTPTS SQTVAAQQAR
AKGFALDLSM GGPDEEDLDF RQSA
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