More than 300 homologs were found in PanDaTox collection
for query gene Avi_4314 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  63.92 
 
 
569 aa  653    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  100 
 
 
564 aa  1116    Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  63.46 
 
 
569 aa  650    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  61.39 
 
 
606 aa  590  1e-167  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  61.42 
 
 
560 aa  585  1e-166  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
602 aa  559  1e-158  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
602 aa  543  1e-153  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  53.32 
 
 
569 aa  521  1e-146  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  55.39 
 
 
599 aa  500  1e-140  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  84.59 
 
 
642 aa  474  1e-132  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  49.35 
 
 
611 aa  470  1.0000000000000001e-131  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  73.58 
 
 
774 aa  452  1.0000000000000001e-126  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  75.58 
 
 
640 aa  449  1e-125  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  61.34 
 
 
640 aa  448  1.0000000000000001e-124  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  53.82 
 
 
566 aa  435  1e-120  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  71.26 
 
 
619 aa  423  1e-117  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  56.63 
 
 
691 aa  413  1e-114  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  45.85 
 
 
551 aa  413  1e-114  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  54.61 
 
 
705 aa  410  1e-113  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  54.14 
 
 
738 aa  409  1e-113  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  47.24 
 
 
609 aa  406  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
693 aa  402  1e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  43.51 
 
 
561 aa  394  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  43.51 
 
 
561 aa  393  1e-108  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  56.92 
 
 
637 aa  390  1e-107  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  51.38 
 
 
734 aa  385  1e-106  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  43.87 
 
 
552 aa  380  1e-104  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  58.9 
 
 
702 aa  377  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  48.29 
 
 
747 aa  369  1e-101  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  55.3 
 
 
676 aa  371  1e-101  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
576 aa  370  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  42.46 
 
 
551 aa  371  1e-101  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  55.02 
 
 
733 aa  368  1e-100  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
558 aa  365  2e-99  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  55.13 
 
 
677 aa  365  2e-99  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  44.96 
 
 
553 aa  362  8e-99  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  62.43 
 
 
640 aa  362  9e-99  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  44.81 
 
 
553 aa  360  3e-98  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  57.94 
 
 
566 aa  358  9.999999999999999e-98  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  44.46 
 
 
563 aa  358  9.999999999999999e-98  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  47.76 
 
 
554 aa  355  2e-96  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  53.07 
 
 
563 aa  353  2.9999999999999997e-96  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  60.27 
 
 
650 aa  354  2.9999999999999997e-96  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  42.4 
 
 
534 aa  352  1e-95  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  42.26 
 
 
534 aa  350  3e-95  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  40.97 
 
 
560 aa  346  7e-94  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
560 aa  346  7e-94  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
566 aa  342  1e-92  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  43.99 
 
 
568 aa  341  2e-92  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  56.99 
 
 
581 aa  338  1.9999999999999998e-91  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  41.27 
 
 
562 aa  334  2e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  59 
 
 
546 aa  333  5e-90  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  55.71 
 
 
727 aa  331  2e-89  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  55.43 
 
 
868 aa  332  2e-89  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  56.36 
 
 
1500 aa  331  2e-89  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  62.99 
 
 
568 aa  325  9e-88  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  42.48 
 
 
547 aa  324  2e-87  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  51.94 
 
 
690 aa  323  4e-87  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
550 aa  323  4e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  56.19 
 
 
494 aa  322  9.999999999999999e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  62.08 
 
 
686 aa  320  3e-86  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.52 
 
 
1046 aa  318  2e-85  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  61.18 
 
 
554 aa  318  2e-85  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  48.24 
 
 
551 aa  318  2e-85  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  56.89 
 
 
548 aa  317  3e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  53.06 
 
 
597 aa  316  7e-85  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
735 aa  316  7e-85  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
735 aa  315  9.999999999999999e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  62.91 
 
 
652 aa  315  9.999999999999999e-85  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  59.6 
 
 
608 aa  314  1.9999999999999998e-84  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  51.52 
 
 
969 aa  313  4.999999999999999e-84  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  61.07 
 
 
823 aa  312  1e-83  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  54.62 
 
 
659 aa  311  2e-83  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
550 aa  311  2e-83  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
551 aa  311  2e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  61.27 
 
 
617 aa  311  2e-83  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  53.5 
 
 
674 aa  311  2e-83  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  60.98 
 
 
621 aa  310  4e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  62.07 
 
 
962 aa  308  1.0000000000000001e-82  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  55.14 
 
 
553 aa  308  2.0000000000000002e-82  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
675 aa  306  5.0000000000000004e-82  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.16 
 
 
1089 aa  306  7e-82  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
547 aa  306  8.000000000000001e-82  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  37.82 
 
 
541 aa  304  2.0000000000000002e-81  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.12 
 
 
1088 aa  305  2.0000000000000002e-81  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  65.94 
 
 
1093 aa  304  2.0000000000000002e-81  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  35.94 
 
 
551 aa  303  7.000000000000001e-81  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  55.99 
 
 
740 aa  300  5e-80  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  42.93 
 
 
562 aa  300  7e-80  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
553 aa  298  1e-79  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
562 aa  298  2e-79  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  65.22 
 
 
685 aa  298  3e-79  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  56.09 
 
 
780 aa  297  3e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  54.11 
 
 
1049 aa  296  8e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  56.65 
 
 
780 aa  296  9e-79  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
1048 aa  295  1e-78  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
553 aa  295  1e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  57.49 
 
 
727 aa  295  1e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  50.28 
 
 
682 aa  295  1e-78  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  51.15 
 
 
720 aa  295  1e-78  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
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