More than 300 homologs were found in PanDaTox collection
for query gene RSP_3108 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  100 
 
 
562 aa  1085    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  98.22 
 
 
562 aa  1070    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  59.43 
 
 
562 aa  600  1e-170  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  48.69 
 
 
561 aa  428  1e-118  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  48.86 
 
 
561 aa  426  1e-118  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  48.33 
 
 
551 aa  422  1e-117  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  48.94 
 
 
551 aa  422  1e-117  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  48.93 
 
 
552 aa  411  1e-113  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  51.61 
 
 
553 aa  407  1.0000000000000001e-112  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  51.41 
 
 
553 aa  405  1.0000000000000001e-112  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  46.69 
 
 
534 aa  344  2.9999999999999997e-93  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  46.69 
 
 
534 aa  343  4e-93  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  44.5 
 
 
547 aa  328  2.0000000000000001e-88  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  41.55 
 
 
569 aa  321  1.9999999999999998e-86  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
569 aa  316  8e-85  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  40.99 
 
 
560 aa  314  2.9999999999999996e-84  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  41.78 
 
 
569 aa  314  2.9999999999999996e-84  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  40.99 
 
 
560 aa  314  2.9999999999999996e-84  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  41.19 
 
 
564 aa  308  2.0000000000000002e-82  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  54.22 
 
 
705 aa  306  6e-82  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
554 aa  301  2e-80  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
560 aa  294  4e-78  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  39.61 
 
 
611 aa  293  5e-78  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
747 aa  289  9e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  44.76 
 
 
519 aa  288  1e-76  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  41.56 
 
 
677 aa  289  1e-76  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  44.76 
 
 
519 aa  288  1e-76  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  48.56 
 
 
566 aa  288  2e-76  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  54.18 
 
 
637 aa  287  2.9999999999999996e-76  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  43.09 
 
 
555 aa  283  5.000000000000001e-75  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  44.6 
 
 
558 aa  280  6e-74  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
676 aa  277  4e-73  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
576 aa  275  2.0000000000000002e-72  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
602 aa  273  5.000000000000001e-72  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  52.01 
 
 
640 aa  273  6e-72  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  38.56 
 
 
546 aa  273  7e-72  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
640 aa  270  5e-71  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  39.84 
 
 
566 aa  269  8e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  46.25 
 
 
693 aa  269  8.999999999999999e-71  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  46.95 
 
 
566 aa  268  2e-70  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  44.32 
 
 
738 aa  267  2.9999999999999995e-70  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
581 aa  267  4e-70  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  50.88 
 
 
619 aa  266  5.999999999999999e-70  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  47.38 
 
 
691 aa  266  5.999999999999999e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  42.18 
 
 
519 aa  266  7e-70  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
597 aa  265  1e-69  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
548 aa  265  2e-69  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
563 aa  264  4e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  45.8 
 
 
702 aa  263  6e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  47.35 
 
 
568 aa  263  8.999999999999999e-69  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  52.58 
 
 
554 aa  261  2e-68  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
734 aa  260  4e-68  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
544 aa  258  1e-67  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  47.03 
 
 
640 aa  259  1e-67  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
550 aa  258  2e-67  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  36.27 
 
 
551 aa  255  1.0000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  47.78 
 
 
650 aa  256  1.0000000000000001e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  36.07 
 
 
606 aa  256  1.0000000000000001e-66  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  47.78 
 
 
727 aa  254  2.0000000000000002e-66  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  49.7 
 
 
553 aa  255  2.0000000000000002e-66  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  51.94 
 
 
563 aa  254  4.0000000000000004e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
621 aa  253  4.0000000000000004e-66  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
524 aa  253  7e-66  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
674 aa  253  8.000000000000001e-66  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  50.82 
 
 
642 aa  253  9.000000000000001e-66  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  36.59 
 
 
551 aa  252  1e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
599 aa  252  1e-65  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  35.74 
 
 
568 aa  251  3e-65  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.17 
 
 
1046 aa  251  3e-65  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
547 aa  251  3e-65  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
617 aa  251  3e-65  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  38.45 
 
 
609 aa  250  6e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
602 aa  249  8e-65  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
690 aa  249  9e-65  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  44.14 
 
 
675 aa  249  1e-64  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  46.04 
 
 
868 aa  249  1e-64  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  47.15 
 
 
494 aa  248  2e-64  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  35.09 
 
 
541 aa  248  2e-64  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  49.09 
 
 
733 aa  247  4e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_007494  RSP_3420  methyl-accepting chemotaxis protein  41.78 
 
 
524 aa  246  6e-64  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
1500 aa  245  9.999999999999999e-64  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  55.6 
 
 
774 aa  245  9.999999999999999e-64  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  51 
 
 
686 aa  244  3e-63  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
608 aa  241  2.9999999999999997e-62  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  49.71 
 
 
962 aa  240  4e-62  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  49.14 
 
 
735 aa  240  5.999999999999999e-62  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
551 aa  238  2e-61  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  49.27 
 
 
735 aa  237  5.0000000000000005e-61  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
550 aa  236  7e-61  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
740 aa  236  7e-61  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
551 aa  236  1.0000000000000001e-60  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2000  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
559 aa  236  1.0000000000000001e-60  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.25845  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.63 
 
 
1089 aa  234  2.0000000000000002e-60  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
532 aa  234  2.0000000000000002e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
780 aa  235  2.0000000000000002e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
727 aa  234  3e-60  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.4 
 
 
1088 aa  234  4.0000000000000004e-60  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
555 aa  232  1e-59  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  44.19 
 
 
543 aa  232  1e-59  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  49.48 
 
 
969 aa  231  2e-59  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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