More than 300 homologs were found in PanDaTox collection
for query gene RPC_4671 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  54.4 
 
 
702 aa  636    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  54.57 
 
 
733 aa  642    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  100 
 
 
691 aa  1370    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  74.64 
 
 
693 aa  948    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  67.31 
 
 
734 aa  861    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  57.05 
 
 
738 aa  736    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  86.09 
 
 
640 aa  527  1e-148  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  69.5 
 
 
566 aa  482  1e-135  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  64.03 
 
 
609 aa  472  1.0000000000000001e-131  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  45.71 
 
 
747 aa  463  1e-129  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  60 
 
 
705 aa  449  1e-125  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  52.51 
 
 
569 aa  435  1e-120  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  60.27 
 
 
560 aa  433  1e-120  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  54.42 
 
 
611 aa  431  1e-119  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  71.63 
 
 
650 aa  427  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  62.5 
 
 
564 aa  415  1e-114  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  57.21 
 
 
569 aa  409  1.0000000000000001e-112  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  56.8 
 
 
569 aa  402  1e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
602 aa  384  1e-105  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  65.9 
 
 
640 aa  379  1e-104  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  53.58 
 
 
599 aa  382  1e-104  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
602 aa  377  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  63.03 
 
 
637 aa  373  1e-102  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  65.89 
 
 
640 aa  373  1e-102  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  56.49 
 
 
606 aa  368  1e-100  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  72.92 
 
 
774 aa  363  5.0000000000000005e-99  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  54.33 
 
 
558 aa  348  3e-94  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  55.52 
 
 
566 aa  346  7e-94  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
576 aa  346  8e-94  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  46.85 
 
 
554 aa  345  2e-93  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  46.78 
 
 
560 aa  345  2e-93  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
560 aa  345  2e-93  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
676 aa  340  5e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
677 aa  339  9.999999999999999e-92  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  50.78 
 
 
563 aa  338  1.9999999999999998e-91  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  52.34 
 
 
552 aa  338  1.9999999999999998e-91  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  55.24 
 
 
563 aa  337  2.9999999999999997e-91  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  65.2 
 
 
642 aa  336  7e-91  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  52.13 
 
 
551 aa  335  2e-90  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  51.7 
 
 
619 aa  335  2e-90  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  59.34 
 
 
566 aa  334  4e-90  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  49.67 
 
 
568 aa  332  2e-89  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  58.01 
 
 
553 aa  331  3e-89  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  58.01 
 
 
553 aa  330  4e-89  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  62.78 
 
 
581 aa  328  2.0000000000000001e-88  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  58.2 
 
 
494 aa  325  1e-87  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  50.13 
 
 
597 aa  322  9.999999999999999e-87  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  51.46 
 
 
534 aa  321  3e-86  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  51.19 
 
 
534 aa  320  7e-86  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0683  methyl-accepting chemotaxis protein, putative  48.46 
 
 
568 aa  317  4e-85  Geobacter sulfurreducens PCA  Bacteria  normal  0.268569  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  62.28 
 
 
554 aa  317  5e-85  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
1500 aa  314  3.9999999999999997e-84  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  53.89 
 
 
659 aa  313  6.999999999999999e-84  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  45.93 
 
 
617 aa  310  8e-83  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  53.11 
 
 
546 aa  308  2.0000000000000002e-82  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  45.95 
 
 
561 aa  308  3e-82  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  45.69 
 
 
621 aa  307  4.0000000000000004e-82  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  64.54 
 
 
686 aa  306  6e-82  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
548 aa  306  1.0000000000000001e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  56.85 
 
 
735 aa  305  2.0000000000000002e-81  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  56.85 
 
 
735 aa  305  2.0000000000000002e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  50.79 
 
 
547 aa  305  2.0000000000000002e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
561 aa  304  4.0000000000000003e-81  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  50 
 
 
562 aa  304  4.0000000000000003e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  44.04 
 
 
551 aa  303  9e-81  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_008751  Dvul_1207  methyl-accepting chemotaxis sensory transducer  51.88 
 
 
720 aa  303  1e-80  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.149931 
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  59.55 
 
 
553 aa  301  2e-80  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  56.56 
 
 
1089 aa  300  6e-80  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  52 
 
 
727 aa  298  2e-79  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  50.27 
 
 
675 aa  298  2e-79  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  51.79 
 
 
969 aa  298  3e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.04 
 
 
1088 aa  296  1e-78  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
608 aa  295  1e-78  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  55.37 
 
 
727 aa  296  1e-78  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.67 
 
 
1046 aa  295  2e-78  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_008576  Mmc1_2401  methyl-accepting chemotaxis sensory transducer  51.09 
 
 
674 aa  295  3e-78  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000495749  normal  0.0928318 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  37.56 
 
 
652 aa  295  3e-78  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  54.16 
 
 
1093 aa  295  3e-78  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
740 aa  293  5e-78  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  61.73 
 
 
962 aa  290  8e-77  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1108  methyl-accepting chemotaxis sensory transducer  63.6 
 
 
685 aa  286  5.999999999999999e-76  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
547 aa  286  1.0000000000000001e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  62.65 
 
 
868 aa  286  1.0000000000000001e-75  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
550 aa  285  2.0000000000000002e-75  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  61.54 
 
 
823 aa  285  2.0000000000000002e-75  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  40.09 
 
 
551 aa  284  4.0000000000000003e-75  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  52.29 
 
 
780 aa  284  4.0000000000000003e-75  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  48.95 
 
 
544 aa  283  7.000000000000001e-75  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
1049 aa  281  2e-74  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3297  chemotaxis sensory transducer  43.73 
 
 
543 aa  281  2e-74  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2159  methyl-accepting chemotaxis sensory transducer  52.13 
 
 
561 aa  281  3e-74  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.182871  n/a   
 
 
-
 
NC_009483  Gura_1191  methyl-accepting chemotaxis sensory transducer  56.94 
 
 
846 aa  280  5e-74  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  60.14 
 
 
780 aa  279  1e-73  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  46.55 
 
 
541 aa  278  3e-73  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1280  methyl-accepting chemotaxis sensory transducer  63.39 
 
 
1048 aa  277  6e-73  Geobacter sp. M21  Bacteria  n/a    normal  0.0818053 
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  45.98 
 
 
551 aa  277  6e-73  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  42.93 
 
 
551 aa  274  3e-72  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
551 aa  274  5.000000000000001e-72  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  49.01 
 
 
550 aa  273  8.000000000000001e-72  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3308  methyl-accepting chemotaxis sensory transducer  48.72 
 
 
682 aa  271  2e-71  Magnetococcus sp. MC-1  Bacteria  normal  0.785168  normal 
 
 
-
 
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