More than 300 homologs were found in PanDaTox collection
for query gene RSP_3420 on replicon NC_007494
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007494  RSP_3420  methyl-accepting chemotaxis protein  100 
 
 
524 aa  1014    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3065  methyl-accepting chemotaxis sensory transducer  99.24 
 
 
524 aa  1004    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.60396 
 
 
-
 
NC_009428  Rsph17025_1046  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
551 aa  288  2e-76  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3443  methyl-accepting chemotaxis sensory transducer  39.85 
 
 
553 aa  286  7e-76  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0628443 
 
 
-
 
NC_007494  RSP_3708  methyl accepting chemotaxis protein  39.81 
 
 
553 aa  284  3.0000000000000004e-75  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3251  hypothetical protein  44.63 
 
 
552 aa  276  8e-73  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.367816  normal  0.217501 
 
 
-
 
NC_009431  Rsph17025_4246  hypothetical protein  38.57 
 
 
562 aa  267  4e-70  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.2464  normal  0.120296 
 
 
-
 
NC_007494  RSP_3083  methyl accepting chemotaxis protein  36.66 
 
 
561 aa  251  3e-65  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.481742  n/a   
 
 
-
 
NC_009050  Rsph17029_3810  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
561 aa  249  1e-64  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.296432 
 
 
-
 
NC_009050  Rsph17029_4036  methyl-accepting chemotaxis sensory transducer  49.2 
 
 
534 aa  245  9.999999999999999e-64  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3303  putative methyl accepting chemotaxis protein, McpG  49.2 
 
 
534 aa  245  9.999999999999999e-64  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.627808  n/a   
 
 
-
 
NC_009429  Rsph17025_3891  hypothetical protein  45.77 
 
 
551 aa  243  3.9999999999999997e-63  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.452082 
 
 
-
 
NC_010510  Mrad2831_5777  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
705 aa  239  5.999999999999999e-62  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.807181  normal  0.137814 
 
 
-
 
NC_009050  Rsph17029_3837  methyl-accepting chemotaxis sensory transducer  38.34 
 
 
562 aa  230  5e-59  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3108  putative methyl accepting chemotaxis protein  38.34 
 
 
562 aa  229  8e-59  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3299  hypothetical protein  50 
 
 
547 aa  223  8e-57  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.530599  normal  0.4786 
 
 
-
 
NC_010338  Caul_0614  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
560 aa  218  2e-55  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1401  chemotaxis sensory transducer  40.37 
 
 
569 aa  217  2.9999999999999998e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4314  methyl-accepting chemotaxis protein  42.37 
 
 
564 aa  216  9e-55  Agrobacterium vitis S4  Bacteria  normal  0.77703  n/a   
 
 
-
 
NC_009431  Rsph17025_4277  hypothetical protein  44.86 
 
 
555 aa  214  1.9999999999999998e-54  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.280884  normal 
 
 
-
 
NC_007493  RSP_2442  methyl accepting chemotaxis protein, McpB  44.88 
 
 
560 aa  213  4.9999999999999996e-54  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.648609  n/a   
 
 
-
 
NC_009049  Rsph17029_1106  methyl-accepting chemotaxis sensory transducer  44.88 
 
 
560 aa  213  4.9999999999999996e-54  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.809659 
 
 
-
 
NC_007494  RSP_3432  methyl-accepting chemotaxis protein  35.93 
 
 
519 aa  213  7e-54  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0745866  n/a   
 
 
-
 
NC_009050  Rsph17029_3077  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
519 aa  213  7e-54  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.268982  normal  0.422774 
 
 
-
 
NC_009429  Rsph17025_3682  hypothetical protein  35.46 
 
 
519 aa  211  2e-53  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.552968 
 
 
-
 
NC_007925  RPC_4671  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
691 aa  211  3e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6735  methyl-accepting chemotaxis receptor (MCP)  43.03 
 
 
566 aa  208  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0787905  normal 
 
 
-
 
NC_007925  RPC_4672  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
693 aa  207  6e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3297  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
548 aa  206  6e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4817  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
747 aa  204  3e-51  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00849638 
 
 
-
 
NC_007643  Rru_A1404  chemotaxis sensory transducer  40.4 
 
 
611 aa  203  6e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.011031  n/a   
 
 
-
 
NC_012850  Rleg_3561  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
569 aa  202  8e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.216373 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
677 aa  202  9.999999999999999e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_011369  Rleg2_3262  methyl-accepting chemotaxis sensory transducer  43.64 
 
 
569 aa  202  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.846629 
 
 
-
 
NC_012918  GM21_0950  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
546 aa  201  3.9999999999999996e-50  Geobacter sp. M21  Bacteria  n/a    normal  0.187483 
 
 
-
 
NC_009485  BBta_6733  putative methyl-accepting chemotaxis protein  38.67 
 
 
738 aa  198  2.0000000000000003e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.556647  normal 
 
 
-
 
NC_007925  RPC_4674  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
734 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0142  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
733 aa  197  3e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.134985  n/a   
 
 
-
 
NC_009483  Gura_2779  methyl-accepting chemotaxis sensory transducer  41.37 
 
 
566 aa  197  3e-49  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1421  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
676 aa  197  4.0000000000000005e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.45919  n/a   
 
 
-
 
NC_012918  GM21_0949  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
554 aa  196  1e-48  Geobacter sp. M21  Bacteria  n/a    normal  0.0219131 
 
 
-
 
NC_011769  DvMF_2542  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
597 aa  193  6e-48  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
558 aa  193  8e-48  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  40 
 
 
566 aa  191  2.9999999999999997e-47  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7837  putative methyl-accepting chemotaxis protein (MCP)  42.51 
 
 
702 aa  190  5e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3559  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
602 aa  189  9e-47  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.495549  normal  0.432808 
 
 
-
 
NC_002939  GSU1298  methyl-accepting chemotaxis protein  38.14 
 
 
568 aa  189  1e-46  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3261  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
640 aa  189  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.444549 
 
 
-
 
NC_012850  Rleg_3560  methyl-accepting chemotaxis sensory transducer  42.91 
 
 
640 aa  189  1e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.521589  normal  0.347271 
 
 
-
 
NC_011989  Avi_4312  methyl-accepting chemotaxis protein  32.29 
 
 
606 aa  188  3e-46  Agrobacterium vitis S4  Bacteria  normal  0.623028  n/a   
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  41.25 
 
 
494 aa  187  5e-46  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2985  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
576 aa  186  7e-46  Geobacter uraniireducens Rf4  Bacteria  normal  0.293775  n/a   
 
 
-
 
NC_007760  Adeh_3897  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
551 aa  186  7e-46  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.198365  n/a   
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
553 aa  186  8e-46  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_4039  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
551 aa  186  1.0000000000000001e-45  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3998  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
550 aa  186  1.0000000000000001e-45  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1300  methyl-accepting chemotaxis protein  40.51 
 
 
563 aa  185  2.0000000000000003e-45  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3298  methyl-accepting chemotaxis sensory transducer  39.87 
 
 
553 aa  184  2.0000000000000003e-45  Geobacter bemidjiensis Bem  Bacteria  normal  0.62981  n/a   
 
 
-
 
NC_010338  Caul_0615  methyl-accepting chemotaxis sensory transducer  39.67 
 
 
599 aa  185  2.0000000000000003e-45  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
553 aa  185  2.0000000000000003e-45  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_009485  BBta_7836  methyl-accepting chemotaxis receptor (MCP)  39.53 
 
 
609 aa  184  4.0000000000000006e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.518607  normal  0.95176 
 
 
-
 
NC_013173  Dbac_2647  methyl-accepting chemotaxis sensory transducer  41.52 
 
 
554 aa  184  5.0000000000000004e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.910941  n/a   
 
 
-
 
NC_011981  Avi_7320  methyl-accepting chemotaxis protein  44.65 
 
 
774 aa  183  5.0000000000000004e-45  Agrobacterium vitis S4  Bacteria  normal  0.364364  n/a   
 
 
-
 
NC_009428  Rsph17025_1788  methyl-accepting chemotaxis sensory transducer  44.11 
 
 
544 aa  183  5.0000000000000004e-45  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  42.81 
 
 
619 aa  182  1e-44  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_007643  Rru_A1403  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
637 aa  182  1e-44  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3844  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
556 aa  182  1e-44  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4673  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
640 aa  182  1e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3761  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
557 aa  182  1e-44  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1105  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
563 aa  182  2e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  32.04 
 
 
602 aa  181  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
581 aa  181  4e-44  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4313  methyl-accepting chemotaxis protein  44.93 
 
 
642 aa  181  4e-44  Agrobacterium vitis S4  Bacteria  normal  0.7654  n/a   
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
675 aa  179  1e-43  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.17 
 
 
1046 aa  178  2e-43  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_007519  Dde_1077  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
690 aa  178  2e-43  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.317064  n/a   
 
 
-
 
NC_009439  Pmen_1567  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
547 aa  178  2e-43  Pseudomonas mendocina ymp  Bacteria  normal  0.0467505  normal 
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
553 aa  177  3e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
550 aa  177  3e-43  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  35.4 
 
 
551 aa  177  4e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6734  methyl-accepting chemotaxis receptor (MCP)  43.26 
 
 
650 aa  176  6e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.221073  normal 
 
 
-
 
NC_002939  GSU1141  methyl-accepting chemotaxis protein  37.69 
 
 
529 aa  176  9.999999999999999e-43  Geobacter sulfurreducens PCA  Bacteria  normal  0.0751853  n/a   
 
 
-
 
NC_011769  DvMF_0621  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
727 aa  175  9.999999999999999e-43  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0173671 
 
 
-
 
NC_011891  A2cp1_3671  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
509 aa  175  9.999999999999999e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.353813  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  38.18 
 
 
551 aa  175  1.9999999999999998e-42  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007298  Daro_1143  histidine kinase, HAMP region: chemotaxis sensory transducer  34.91 
 
 
541 aa  174  2.9999999999999996e-42  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  42.14 
 
 
727 aa  174  3.9999999999999995e-42  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  40.36 
 
 
1500 aa  173  5.999999999999999e-42  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2710  methyl-accepting chemotaxis sensory transducer  39 
 
 
969 aa  172  1e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  41.67 
 
 
962 aa  172  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3704  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
559 aa  171  3e-41  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_007760  Adeh_1160  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
532 aa  171  4e-41  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2772  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
735 aa  169  8e-41  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1482  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
735 aa  169  1e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
868 aa  169  1e-40  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0333  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.21 
 
 
720 aa  169  1e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_3602  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
509 aa  169  1e-40  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  34.05 
 
 
621 aa  169  1e-40  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
823 aa  169  2e-40  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3837  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
561 aa  168  2e-40  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.834659 
 
 
-
 
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