| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1984 |
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| Symbol | |
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| ID | 3762296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2178990 |
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| End bp | 2181854 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786733 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_392248 |
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| Protein GI | 78486323 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAATA ATTCTCCTGT TACCCAAAAA GAGTACGACA TCCCCAGTAA TTACATCCTT
GTTTCTGAAA CCGATTTACA AGGCAATATT ACGTTTGCAA ACCAGGAGTT TATTGAAGTC
AGTGGCTTTT CTTGGGAGGA ATTGAAAGGG CAACCCCACA ATTTAATTCG TCACCCTGAT
GTACCTGAAA AAGTCTTTGA AGATTTATGG CGTACGCTGA AAAAAGGCCA GCCATGGCAT
CAACTGGTTA AGAACCGTTG TAAAAATGGA GACCATTATT GGGTTGAAGC GAACATTGCT
CCTATTTTTC AAAATGGAGA AATCGTAGGG TATAAATCGA TTCGTAACCC GATCAGCCAA
AAAGAAGTGG CTTTGGCAGA AAGCGCTTAC ACCTTAATTA AGAAAGGGGA GCGTTTAATT
AAGGAAGGGG TTGTCGTAAC ACCATTCTCA CAAAAAATTG CGCGTCTCAG TCCTTTGCCG
CAAAAAAGCA TTTTAGGCAA AACCATCATT CCTTTGATTA TGATGGCCAT TATATGGAGT
GCGGTATTGC AGGTGTATTT ACAGAATGTG GCCGACAATC TTTATACCGG TGCGGTTAAG
GATCGTCAGC AACTCCTGCT TAAAAACCTG GATTCGGAAA TTTCTAGCCA AAGCCAAATC
GCTTTGACGA ATGCGGTTGG GATAGCCGGG AACTCAGCGG TCATTTATGG TTTGTATGAC
CATCAAGATA CGGTGCTGTG GCAAATCGTT AAGGTTAACT ACGAACAGTA TGTTAAGCGC
GCTAATATGT CCGGAATTGG GATTGCAATC TTTGATGCTA ATTTAAAGAA AGTGGCCAAC
AGTGGCGTCA ATATTGATGT TGGGTCTCTT CCAAAAAAAG CGCAAACCGC GATTCATTTT
CAAAAGGAAG GCGGTTACAT TCAGGCGCAA GTTCCTGTGC CATATGGGGA TAAAACGATT
GGCTTGGTGG TCATTAGTTT ACCGTTAACT CAAGTCGCCG ATTTAGAAAA AGAATCCAAA
CATGGGTATG CAGCATTAGC CTTTGAAGAA GACCGTTTCC ACTTGGCAGA AGGGTTTCAA
AACTCGCCAA TCCAGCAATT GTTAAAAGAC GCTGAGATGG AGCGCTTGGC CACACAGGGC
TATACGGTCG TGGATAATGA ATTGCTGGTC TTGGGACTGG TTAAGCAAGA TGACCAAGTG
GTGGGTGCAC ATGTGGTTTC AGAACCGATG GTGATTCTGG ATAAATTGTT AAGTGATACG
TATTTTATGA TTTACGTGTC GCAAATCGCG ATGTCGGGTG GTTTTATTCT GTTGTTGATT
CAAGTGTATT GGCGGATGCG AAGTTTTGTA TTGAAGCCAT TGAAGTCCCT AACGCAAAAA
CTTTCAAGAG CTTCGGAAGA AGGCAGCTTG TCAGTACGTG CAGATGTGGT GAATCAAGAT
GAAATAGGCC GGATGGCGAC AAACTTTAAC TTGTATGTAA CGTCGGTTCA GCAGTTAATG
GTAGGGGTGT CTGATATGGT ATCAGCCTTG TCGAAAGGCA ATTTGCATCA TCGCTATAAA
GCCGATGCAA AAGGCGATCT GAATATTCTA AAAGAAGACG TCAATATGTC AGCAGACAAG
ATTAAAGATG TCATTTCCGA GCTTGAACGT GCCATCCATT GCATTAAAGA AGCAACGTAT
GACTTTGAAT CTCAAACTCA GTTTGAGGGG GATTTCTCGG TGATGGTGTC GGATCTGCAA
GATGCAATGA AGGTGACTCA TGAAGCGGTT ACCGGCATTA ATGCGACCAT GGAAGATATT
GCAGCAGGAG AATTCTCAAG TCGTTTGAAT GCCAATTTAA TGGGCGAGCT GGATGCCTTG
AAAACCAATA TTAATCACTC GTTAGACCAA TTAGAAGATG GGATTACCGA GGCCGTTGAC
GTAATTGTCG CACAATCCAA AGGCGATTTA ACGCAGCGCA TTGAGGGTGA TTATCAAGGA
AAACTAAACG TGATGAAAGA GGCTCTGAAT GCCTCTTTGG ATAATGTCAG TGGCGCCGTG
TCTGGGTTAA TGTTGTCTTC CCAAACAGTG AATGATGCTT CAAGTCAAAT AGCCTCAGGC
AGTCAGGATT TATCGGATCG TATTCAACAA CAGGCGTCCA CGTTGCAAGA AACGGTTAAC
TCCATGGAGT CGATTACGCA AACGGTGCGT AAGAACGCAG AGAGTGCCAA AGAAGCTTCA
GATTTGGCTT CATCCGCCAA GGTACAGGCT GATAGTGGGG CAGCGGTCAT GTCTCAGACC
ATGAACTCCA TGCAGGAGCT GTCAGAGTCG AGTCAGAAGA TTTCCGATAT TATTGGATTG
ATTGATTCCA TTGCCTTCCA AACCAACTTG CTGGCGTTAA ATGCCGCCGT TGAAGCCGCA
AGAGCGGGCG AACAGGGTCG TGGGTTTGCT GTTGTGGCCG GTGAAGTTCG TACCTTGGCC
GGTAAGTCAG CTGAAGCCGC CAAAGAAATT CGGAGTTTGA TTGAAACGAG TGTGAGCCAG
GTGGCGCACA GTGAAGGATT GGTTGCGAAA TCTGAACAGG AGTTTTCATC CATTCTGGAA
ATGATTTTAC AGATGGATCG TTTTATTTCG GATATTGCGA AAGCCAACAA TGAACAAACG
AAGAGCATTG AGGAAATCAA TGAAGCGGTC GAGGACATGG ATGGTGTGAC TCAACAAAAT
GCGGCATTGG TTGAAGAAAC AGCACATGCA GCAGATATGC TTAAAGGAGA AGCGGAAGAA
ATGCGTAGCC AAGTTACGTA TTTCCGTGTA AAGCCAGGAC AAAACAATAG GTTGGCCGCC
CCGAAAAATC CGCAAATGGC TGCGTTGCCT GAAGTGATTA AATAA
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| Protein sequence | MRNNSPVTQK EYDIPSNYIL VSETDLQGNI TFANQEFIEV SGFSWEELKG QPHNLIRHPD
VPEKVFEDLW RTLKKGQPWH QLVKNRCKNG DHYWVEANIA PIFQNGEIVG YKSIRNPISQ
KEVALAESAY TLIKKGERLI KEGVVVTPFS QKIARLSPLP QKSILGKTII PLIMMAIIWS
AVLQVYLQNV ADNLYTGAVK DRQQLLLKNL DSEISSQSQI ALTNAVGIAG NSAVIYGLYD
HQDTVLWQIV KVNYEQYVKR ANMSGIGIAI FDANLKKVAN SGVNIDVGSL PKKAQTAIHF
QKEGGYIQAQ VPVPYGDKTI GLVVISLPLT QVADLEKESK HGYAALAFEE DRFHLAEGFQ
NSPIQQLLKD AEMERLATQG YTVVDNELLV LGLVKQDDQV VGAHVVSEPM VILDKLLSDT
YFMIYVSQIA MSGGFILLLI QVYWRMRSFV LKPLKSLTQK LSRASEEGSL SVRADVVNQD
EIGRMATNFN LYVTSVQQLM VGVSDMVSAL SKGNLHHRYK ADAKGDLNIL KEDVNMSADK
IKDVISELER AIHCIKEATY DFESQTQFEG DFSVMVSDLQ DAMKVTHEAV TGINATMEDI
AAGEFSSRLN ANLMGELDAL KTNINHSLDQ LEDGITEAVD VIVAQSKGDL TQRIEGDYQG
KLNVMKEALN ASLDNVSGAV SGLMLSSQTV NDASSQIASG SQDLSDRIQQ QASTLQETVN
SMESITQTVR KNAESAKEAS DLASSAKVQA DSGAAVMSQT MNSMQELSES SQKISDIIGL
IDSIAFQTNL LALNAAVEAA RAGEQGRGFA VVAGEVRTLA GKSAEAAKEI RSLIETSVSQ
VAHSEGLVAK SEQEFSSILE MILQMDRFIS DIAKANNEQT KSIEEINEAV EDMDGVTQQN
AALVEETAHA ADMLKGEAEE MRSQVTYFRV KPGQNNRLAA PKNPQMAALP EVIK
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