| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0051 |
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| Symbol | |
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| ID | 5320878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 52377 |
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| End bp | 54767 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640788982 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001325746 |
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| Protein GI | 150395279 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000874578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAAGT TTCGAGCCAG ATCGCTGGCG ACCAAGCTGA TCGCGGTGAC CGGGGGCACC
ATCGCCCTTG TGCTGCTCTC GTCCAATTTC GTTCTCATCT CCCAGACGCA GGACCGTGTG
GAAACGCTGG TCTTCGACGG CGCGAAAACG GAAGCGCGCG CGATTGCCTC GGACATCGCG
GGCAGCGTTG GCGAGCTCGC CGCCGCTGCG CGCACCATGT CGGGCGTGCT TGGACGCGGA
CATGGTGGGC AGTCGACCGA CCGCGCCGGC GCCATCAACC TCCTCAAGGC CAATCTGGAG
CAGCATGCCT TTGCCTTCGG CAGCTGGTTC GCCGAAGAGC CCAAGGCCTA TGATGGAAAG
GACATCGTCG GCAATAGGGA GCTCGGCGGC AATAACGAGG GCGCGTTCAC GCCCTATTGG
TCGAAGGACC GCAACGGCAA TATACAGCTT TCAACCTTCA AGGCAGACTA TTCGGCCGAA
TGGTACAGTC TTGCGGCGAA GAGCGGCAAA GGATCCATCA CCCAGCCATA TCTCGCCGAG
GGCACCGATG TCCCAACCAC GATGACGTCG ATCGCCTATC CCGTCGTTTC GAACGGCAAG
ATGATCGGCG TCTCGGGCGT CGACATTTCG CTCGCCACCC TCGCCGACCG CCTCTCGGCG
ATCAAGCCGT TCGGCTCGGG CCGGGTCTAT CTGCTATCGC AAAGCGGCAA GTGGCTCTCC
GCGCCGATAC CCGAGCTCTT GATGAAGGAA TATGACGGCG AAGGCGCCGA GGTCGTGAAG
AACGCCCTGT CGACGGGTGC CGCCGGCATG GTCGGGAATC TGCAATATGA CGGCAATGAA
CCATTCGACC GCGTGGTGTT TCCGTTCAGT CTGCCCAATG TGAACGCAAA CTGGGTCGTG
CTTGTCGACG TGCCCCGCAC AGCCATCAAT GCGCCTGTAC AGGACCAGAC CTTTATGATG
ATCGTCGGCG GCCTGGTGGT CCTCGGCGCG GTTCTCGCCG GTCTTTATTT CGCTGTTCGC
CGCTTCGTCC AGAAGCCGCT AGCCGGTCTG GTCCGCGATG TCGAGACGCT CAGTGATGGA
GAATATGGCC AGCCGATTTC CGGTCAGGAA CGTTCCGACG AAACCGGCGC CGTAGCCAGA
TCGCTCGAAG GGTTCCGTCA CCAGCTGGCC GACAACAGGC GGCTCGAAAG CGAGGCCCGC
CACGAGAGGG AACAGGCGGA GCTGGAACGC AGCCGGTCTG AAACCGAACG CAGCGAGGCC
GGCGCGCTTC AGCGCGACAT CGTCGCTCGT CTCGGCAAAG GCCTGTCGCA CCTCGCCTCG
GGCGACCTCG CCTTCCGCAT TTCCGGCGAC TTTCCCGGCG AATACGCGCA GTTGAAGCAA
GATTTCAACG CGACGATGGA CAGCCTTGAA GAGACGATCC GCACCGTCAA TCACTCCGTC
GTCAACATCG GCAGCGGCAC CGGAGAGATC TCAAGTGCCG CCAACGACCT GTCGCATCGG
ACGGAACAGC AGGCGGCCAG CCTCGAGGAG ACTGCAGCAG CCTTGGACGA GCTGACGTCG
CAAGTGAACG CCAGCGCCGA AAACGCCAAG ATCGCGGCGA AATCCGTCGA GGTGGCAAGC
GGCGACGCCG AACAATCCGG CGAAGTGGTG CAGAAGGCGA TCGCGGCCAT GCACGGCATC
GAGCAGTCCT CCCATGAAGT CAGCCGCATT ATCGGCGTCA TCGACGAAAT CGCCTTCCAG
ACCAACCTTC TGGCGCTCAA TGCCGGGGTG GAAGCGGCCC GCGCCGGCGA AGCCGGGAAG
GGCTTCGCGG TCGTCGCACA GGAAGTCCGC GAACTCGCGC AGCGCTCGGC GAATGCAGCA
AAGGAGATAA AGACGCTGAT CAACACGTCA GCCGGACAGG TTCGCGAGGG GGTCGACCTC
GTCGGGAAGG CGGGCGGCGC GCTCGAGAAG ATCGCCGAGC AGGTGGTGCA GATCAATGGA
CTTATCCGCC AGATCTCCAG CTCAGCCTCT GAACAGGCAG TCGGCCTGAA GGAGATCAAT
TCTGCCGTAA ACCAGATGGA TCAGGTGACG CAGCAGAATG CGGCCATGGT GGAAGAAACG
ACCGCCGCGA GCATGGCGCT GAACGACGAG GCCCGCGCGC TCTCCGCCCT GGTCGCCCGC
TTCCAGGTCG CTCCGCAAAC AGCGCAGTCC CAGGCACCGG CCGAAATGCT GCGCGGGACG
GCCGCGCGGA TGCGTGCGGC GGAACCCCCT GCGCCGCGCC AGGCTTCTAC GGCAGAGAAC
CGTTCGGCAA CGGCGCCGCG CAATACCGCC TACTCGACTT CGACGCAACG CGGGCTTGCC
AAGACTTCCG GATCCAGTGC ACTCGCACAG GACAATTGGG AAGAATTCTG A
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| Protein sequence | MFKFRARSLA TKLIAVTGGT IALVLLSSNF VLISQTQDRV ETLVFDGAKT EARAIASDIA
GSVGELAAAA RTMSGVLGRG HGGQSTDRAG AINLLKANLE QHAFAFGSWF AEEPKAYDGK
DIVGNRELGG NNEGAFTPYW SKDRNGNIQL STFKADYSAE WYSLAAKSGK GSITQPYLAE
GTDVPTTMTS IAYPVVSNGK MIGVSGVDIS LATLADRLSA IKPFGSGRVY LLSQSGKWLS
APIPELLMKE YDGEGAEVVK NALSTGAAGM VGNLQYDGNE PFDRVVFPFS LPNVNANWVV
LVDVPRTAIN APVQDQTFMM IVGGLVVLGA VLAGLYFAVR RFVQKPLAGL VRDVETLSDG
EYGQPISGQE RSDETGAVAR SLEGFRHQLA DNRRLESEAR HEREQAELER SRSETERSEA
GALQRDIVAR LGKGLSHLAS GDLAFRISGD FPGEYAQLKQ DFNATMDSLE ETIRTVNHSV
VNIGSGTGEI SSAANDLSHR TEQQAASLEE TAAALDELTS QVNASAENAK IAAKSVEVAS
GDAEQSGEVV QKAIAAMHGI EQSSHEVSRI IGVIDEIAFQ TNLLALNAGV EAARAGEAGK
GFAVVAQEVR ELAQRSANAA KEIKTLINTS AGQVREGVDL VGKAGGALEK IAEQVVQING
LIRQISSSAS EQAVGLKEIN SAVNQMDQVT QQNAAMVEET TAASMALNDE ARALSALVAR
FQVAPQTAQS QAPAEMLRGT AARMRAAEPP APRQASTAEN RSATAPRNTA YSTSTQRGLA
KTSGSSALAQ DNWEEF
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