| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3471 |
|---|
| Symbol | |
|---|
| ID | 4681205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 3432705 |
|---|
| End bp | 3434522 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639847724 |
|---|
| Product | putative methyl-accepting chemotaxis protein |
|---|
| Protein accession | YP_994749 |
|---|
| Protein GI | 121601127 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCCT TCATGCTCTC CTCGATCCGG TCCCGCATTC TCGTCGCGTG CCTCGCCATC
GTCATCGGCT CGCTCGTCAT CAACACGGCG CTCAACTATT TCGTCGCCAA CCGCTATAAC
CGCGAGTCCA TCAGCCAGAA CCTCAGCGCG GTGCTGACCG GCCACGAAGC CGGCATCGCC
GATTGGGTCG CGTCGAAGAC GCAGATGATC GTGTCGGTCG AAGACGCCGC GATCTCGCCG
GATCCGATTC CGGCGCTCAA GCAGATCGCC GCCGCCGGCG GGTTCACCAA TGTCTATGTC
GGCTACGCGG ACAAGACCGC GAAATTCTCC GATCCCACCG GTATTCCGCC CGACTACGAT
CCGACCGGCC GCCCGTGGTA CAAGCAGGCC GCGCAGGCGG GCAAGCCGGT CGTCACGCCG
CCCTATGTCG ACGTCGGCAC GGGCAAGCTC GTCGTCGCGT TCGCCGCGCC GATCATGCGC
GACGGCGCGC TGAAGGGCGT CGTGTCCGGC GACGTCGCGA TGGACAGCGT GATCGCGAAC
GTCAAGGCGA TCCACCCGAC GCCCGGCAGT TTCGGGATGC TCGTCGACCG CAGCGGCCAT
ATCGTCGCGC ATGCCGATTC GAAGCTCACG CTCAAGCCCG TCACCGATCT CTCCGACGAT
TTGAGCATCG ACGCGCTCGC CGCGGCGTCG GCCGACGAGA ACGCCGCGCC GATCGACGCG
CACGTCGCGG GCGCGGCGAA GCTGATGCGC GCGCGCGCCG TGCCGGGTAC CGACTGGCTG
ACCGTCGTCG CGCTCGACAA GTCCGATGCG ACGGCCGGCA TGCATTCGCT GCTGCTCGTC
TCGATCGGCA CGCTCGTCGC GCTTGCCGCC GTCGCCGCGC TGATCGTCGG CGCGATCACG
GGCGTCGCGT TCCGCGGGCT CGCGCGCATT CGCGACGCGA TGGAATCGAT CGGCTCCGGC
ACGGGCGATC TGACGCAGCG CCTGCCCGAT AGCGGCCGCG ACGAAGTGGC GCAGATCGCG
CGCTCGTTCA ACGCGTTCGT CAGCAAGCTG CAGGAGGTGA TGCGCGTGAT CCGCGACGCG
AGCGAATCGG TGCGGCATGC GGCGGGCGAG ATCGCGTCGG GCAATCACGA TCTGTCGCGC
CGCACGGAAT CGGCGGCGGC GAGCCTGCAG CAGACGGCCG CGTCGATCGA GGAGATCACG
TCGACGGTCA CGCAATCGGC AGGCGCCGCG CGCCAGGCGA ACGACATCGC GACGAACGCG
GCGAGCGTCG CGTCGCGCGG CGGCACGGTC GTGTCCGACG TCGTGTCGAC GATGCACGAG
ATCGAAGGCG CGTCCGGCAA GATCGCCGAC ATCATCGGCG TGATCGACGG CATCGCGTTC
CAGACCAATA TCCTCGCGCT GAACGCGGCC GTCGAGGCGG CGCGCGCGGG CGAGGAGGGG
CGCGGCTTCG CGGTGGTCGC GGGCGAGGTG CGCTCGCTCG CGCAGCGCAG CGCGCAGGCG
GCGAAGGAAA TCAAGGCGCT GATCGATTCG AGCGTGACGA GCGTGTCGAC GGGCGCCACG
CTCGTCCAGC AGGCCGGGCA GACGATGAGC GACATCGTCG GCACGGTTTC GAACGTGACG
ACGATCATGC GCGAGATCTC GAATGCCGCC GACGAACAGA CGCGCGGCAT CCAGGAAGTG
AATCGCGCGG TCGCGCAGCT CGACGAGATG GTTCAGCAGA ACGCGGCGCT CGTCGAGCAG
TCGGCCGCGG CCGCCTCGGC GTTGCAGACT CAGGCGGTCG AGCTCGCCGA TGCGGTCGGG
CAGTTCAAGG TCGCGTGA
|
|---|
| Protein sequence | MSPFMLSSIR SRILVACLAI VIGSLVINTA LNYFVANRYN RESISQNLSA VLTGHEAGIA
DWVASKTQMI VSVEDAAISP DPIPALKQIA AAGGFTNVYV GYADKTAKFS DPTGIPPDYD
PTGRPWYKQA AQAGKPVVTP PYVDVGTGKL VVAFAAPIMR DGALKGVVSG DVAMDSVIAN
VKAIHPTPGS FGMLVDRSGH IVAHADSKLT LKPVTDLSDD LSIDALAAAS ADENAAPIDA
HVAGAAKLMR ARAVPGTDWL TVVALDKSDA TAGMHSLLLV SIGTLVALAA VAALIVGAIT
GVAFRGLARI RDAMESIGSG TGDLTQRLPD SGRDEVAQIA RSFNAFVSKL QEVMRVIRDA
SESVRHAAGE IASGNHDLSR RTESAAASLQ QTAASIEEIT STVTQSAGAA RQANDIATNA
ASVASRGGTV VSDVVSTMHE IEGASGKIAD IIGVIDGIAF QTNILALNAA VEAARAGEEG
RGFAVVAGEV RSLAQRSAQA AKEIKALIDS SVTSVSTGAT LVQQAGQTMS DIVGTVSNVT
TIMREISNAA DEQTRGIQEV NRAVAQLDEM VQQNAALVEQ SAAAASALQT QAVELADAVG
QFKVA
|
|---|
| |