Gene Daci_5410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5410 
Symbol 
ID5751025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6003652 
End bp6005559 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content68% 
IMG OID641300538 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001566424 
Protein GI160900842 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG ATGATCAGCC AGGCGCCGTC AAGGGTGGAC AAGAATGGTT TCCGGAGCGA 
TGGGCGGCAG GGGCGCCATG GCCTGGCTCC GGCATTTTTA TAAAAAAGAT CGGTTTTTCC
ATGAATCTGA ATCAAATCAC GGTCGCCCAG AAGCTGTGGG CCCTGGTGCT GGGACTGCTG
GTGAGCATGC TGGTGGTCAA CGGCGGCATC CTGGTCTATC TGCATGGGGT CAACGAGAAG
ATCAACACCG ATGTGATGAC CGCGCAAAGC GGCGCCACGC TGGCGCGCGA GTGGCGGCAT
CTGACGCAGA TGAGCGTGGA GCGCTCCATC GTCGCGGCCA TGTCGCCCGA CGAGACGCTG
GCCGCGCAGC AGCGCGCGTT GATGAGCAAG GGCATAGAGC GCATCAACGT GCTGCAAAAG
CAGGTGGGCG ACCTGCAGCT GGGCACGCAG TCCAAGCAGG CGCTGGACGC CGTGGCGGCC
GAGCGCCGCG AGACGCTCAA GGCCAACTCG GCGGCCCAGG AGGCGCGCAA GGCCAACGAT
TTCGCCACCA CGTTCGACAT CGTTGAAAAG CAGCTGCGCC CGGCCGCCGA GCGCTACAAC
AGCGCGCAGG AAGCCTTCGT GCAGCAACTG GAGCGCCAAA GCGAGCTGGG GCGCGAGGAA
GGCGTGGCCC ATCGGCGCCA GGCGTACTGG ATCGGTGCGC TGGCCAGTGC GGTCATCGTG
GCCCTGGGCC TGTTCATGGG GGTGGCCATC ATGCGGTCGA TCACGCGGCC GCTGGACCAG
GCCGTGGCCC TGGCCGACGG CATTGCCGCA GGCGACCTCA CGGGCTCGGT GCAAAGCAAC
CGGGGCGATG AGCTGGGCCA TCTGCTGGGC GCGCTCAACG GCATGGCGCA GCGGCTGCGC
GGCGTGGTGG GCGAAGTGCG CTCTGGCGTG GAGTCCGTGT CCACGGCCTC CAACCAGATC
GCCAGCGGCA ACCAGGACCT GTCCTCGCGC ACCGAGCAGA CAGCGGCCAA CCTGGAGGAG
ACGGCGGCCA GCATGGAAGA GCTGACGGCC ACCGTCACCC AGTCGGCCGA CACGGCGCGC
CAGGCCAACC AGCTGGCGGC CACGGCCGCA CAGGCGGCCG AGCAGGGCGG TGCCGTGGTG
GCCCAGGTGG TCACCAGCAT GCAGCAGATC ACGGACAGCA GCCGCAAGAT CGCCGACATC
ATCGGCGTGA TTGACGGCAT TGCCTTTCAG ACCAATATCC TGGCGCTGAA CGCCGCCGTG
GAAGCGGCCC GCGCAGGCGA GCAGGGCCGG GGCTTTGCCG TGGTGGCGGG CGAGGTGCGC
TCACTGGCCC AGCGCAGCGC CGAGGCCGCC AAGGAAATCA AGCTGCTGAT CACCACCAGT
GTGGACAACG TGCAGTCGGG CTCGAAGCAG GTGGAGCAGG CGGGGCGTTC CATGGAGGAA
ATCGTCTCCA GCGTGCGCCG CGTCAGCGAC CTCATCGGCG AGATCACGGC CTCGTCCACC
GAGCAGCGCG ACGGCATCGG CCAGGTCAAC CAGGCCGTGA CCCAGCTCGA CCAGATGACC
CAGCAGAACG CGGCCCTGGT CGAGGAATCC AGCGCGGCTG CGCTGGCCAT GCAGGACCAG
GCGCGGCGCC TGTCCGAGGT GGTGGCGGTG TTCAAGCTGG GGCAGGAGGG CAGCGCACTG
GCGCCGGCCA GGGCACACGT GCCGGCCACC GCAGCGGCAC GCCGGCCGGC ATCTATCGGC
GCAACCGGTG CAACTGCTGC GGTGCGCCCT GCGCCTGCGG CACCCGCACG TCCAGCGCCC
GCCGTGCGCA ATGCGCCGGC GCCCCAGAAG ATCCAGCAGC CCGTGGCGAA GGCCCCCGCC
AGAACAGCGG CCAAGGCCGG GGCGGACGAC GACTGGGAGA CCTTCTGA
 
Protein sequence
MHDDDQPGAV KGGQEWFPER WAAGAPWPGS GIFIKKIGFS MNLNQITVAQ KLWALVLGLL 
VSMLVVNGGI LVYLHGVNEK INTDVMTAQS GATLAREWRH LTQMSVERSI VAAMSPDETL
AAQQRALMSK GIERINVLQK QVGDLQLGTQ SKQALDAVAA ERRETLKANS AAQEARKAND
FATTFDIVEK QLRPAAERYN SAQEAFVQQL ERQSELGREE GVAHRRQAYW IGALASAVIV
ALGLFMGVAI MRSITRPLDQ AVALADGIAA GDLTGSVQSN RGDELGHLLG ALNGMAQRLR
GVVGEVRSGV ESVSTASNQI ASGNQDLSSR TEQTAANLEE TAASMEELTA TVTQSADTAR
QANQLAATAA QAAEQGGAVV AQVVTSMQQI TDSSRKIADI IGVIDGIAFQ TNILALNAAV
EAARAGEQGR GFAVVAGEVR SLAQRSAEAA KEIKLLITTS VDNVQSGSKQ VEQAGRSMEE
IVSSVRRVSD LIGEITASST EQRDGIGQVN QAVTQLDQMT QQNAALVEES SAAALAMQDQ
ARRLSEVVAV FKLGQEGSAL APARAHVPAT AAARRPASIG ATGATAAVRP APAAPARPAP
AVRNAPAPQK IQQPVAKAPA RTAAKAGADD DWETF