Gene Rpic_4696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4696 
Symbol 
ID6285090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1038424 
End bp1040250 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content66% 
IMG OID642619173 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001893208 
Protein GI187926863 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.319993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0826606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATC GACTGTCCAT CCGTTTCCGA CTCAACGCGG CGCTGTCGCT GCTGGCGGTG 
CTGCTGTTGA CCACCGGCAT CGTCGGTGTG ATCGGCATGC GCGCGTCCGA TGCGAACATC
AACGAGATCT ACACCAACCA GCTTGTCTCG GCGTCCCTCC TGGGCAAGGC GCAACTGAAC
GCGGCGATCG TCCGAACGAC GCTCGATCGC GCTGTCTTTC ATCCGGATGC GGCCGATGTA
CCGGCCATCA TCGACAAGGC CAACGGCTAC CGCGCCAAGT CCGACGACGC CTGGAAGCAG
TACAAGGCGC TGCCCATGTC TGCCGATGAA TCGCGTCTTG CAGCAGAGGT TGAAGCCAGG
CGCAATGCGC TCTTCCGCGA CGGCATCGAG CCGCTGATGA GCGCCCTGCG CGCACGCGAT
GCCGCCGCTG CCGACAAGGT CGTGATGAAC ACCATCCCGC CGCTGTCCGT GGCCCTGACG
TCCGCGGCGG ATGCGCTGGA CCGCAGCCAG GCGGAACAGG CCAAGGCTGC CTATGACGGC
GCGTCGGCGC GCTCGCACGC CTTCCTTTTG CTGATCGTCA GCGCCATTGC GGTGGGCATT
GCCGCCGCGC TCGGTTGTGC GTTCGGCCTG CATCGTGCGA TTTCGGTGCC GCTGTCGCGC
ATGCTGGGCC ACTTTGGCGA GATCTCGCGG GGCAACCTGA CGGAGCACAT CACGGTCACC
AGCCACGACG AGATGGGTGC GCTCACCCGC GGCCTGATCG ATATGCAGCG CGGCCTGATC
CGCACGATCG AGACCATGCG TGGCGGCAGC GAATCCATCG CCAGCGCGAC CAAGCAGATC
GCAGCGGGCA ACATGGACCT CTCGCAGCGG ACGGAAGAGC AGGCCTCTTC GCTCGAAGAG
ACAGCCTCCA GCATGGAAGA GCTCACCAGC ATCGTGAAGC AGAACGCCGA CAACGCGCGC
CAGGCGAGTC AGCTGGCAGG CAATGCATCC GACATCGCGG TCAAGGGCGG CGAGGTGGTC
GGCCGCGTCA TCGAGACGAT GTCCGGTATC AATGACAGCA GCAAGAAGAT TGCCGACATC
ATCGGCGTGA TCGAAGGGAT TGCCTTCCAG ACCAACATCC TCGCGTTGAA TGCGGCGGTG
GAAGCCGCGC GCGCGGGCGA GCAGGGTCGT GGCTTTGCCG TGGTGGCCGG AGAGGTGCGC
AGCCTCGCGC AACGCTCGGC CACGGCTGCC AAGGAAATCA AGGAGCTCAT CAATGATTCG
GTCGGCCGCG TCGAGAATGG CTCGACGCTC GTGACCGAAG CCGGCGCGGT AATCGACGAA
GTGGTGGTGG CCGTCAAGCG CGTGACCGAC ATCATGGGCG AGATCAGCGC GGCATCGGAC
GAGCAGAGTG CCGGTATCGA GCAGGTCAAC CAGGCCGTGA CGCAGATGGA TGAGGTGACG
CAGCAGAATG CGGCGCTGGT GGAAGAAGCC GCAGCCGCGG CGCAATCGCT CGAAGAGCAG
GCGGGTGTAT TGCGCGAGAC CGTGGCTTCG TTCCGCCTGC CGCCGGCGGG CACGCACGCC
GCGCCGGTCG CATCGGCTGC CGCACCCGGG GCTGCATCAG CGTCTGCCGC AAAACCGCTT
CAGCGCAAGC CTGCCGCAGC AACGACGTCG ACGGGACGCG CTGTGCGCAA GCGCGTTGCC
GCGCCGCCCG CCTTGAAGAT GCCGGCGCAA CCGCGAACGG AGCCGGCTGT CGCCCCGGCC
GTTGCTGTTT CTGCCGTTGT GCCCAGGTCA GGCAAGCTCG CCCCGGCAAC CACCTCCAAC
GATGCCGACG ACTGGGAACA GTTCTGA
 
Protein sequence
MLNRLSIRFR LNAALSLLAV LLLTTGIVGV IGMRASDANI NEIYTNQLVS ASLLGKAQLN 
AAIVRTTLDR AVFHPDAADV PAIIDKANGY RAKSDDAWKQ YKALPMSADE SRLAAEVEAR
RNALFRDGIE PLMSALRARD AAAADKVVMN TIPPLSVALT SAADALDRSQ AEQAKAAYDG
ASARSHAFLL LIVSAIAVGI AAALGCAFGL HRAISVPLSR MLGHFGEISR GNLTEHITVT
SHDEMGALTR GLIDMQRGLI RTIETMRGGS ESIASATKQI AAGNMDLSQR TEEQASSLEE
TASSMEELTS IVKQNADNAR QASQLAGNAS DIAVKGGEVV GRVIETMSGI NDSSKKIADI
IGVIEGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSATAA KEIKELINDS
VGRVENGSTL VTEAGAVIDE VVVAVKRVTD IMGEISAASD EQSAGIEQVN QAVTQMDEVT
QQNAALVEEA AAAAQSLEEQ AGVLRETVAS FRLPPAGTHA APVASAAAPG AASASAAKPL
QRKPAAATTS TGRAVRKRVA APPALKMPAQ PRTEPAVAPA VAVSAVVPRS GKLAPATTSN
DADDWEQF