Gene Rmet_5612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5612 
Symboltar 
ID4042476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2368151 
End bp2369692 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content64% 
IMG OID637981031 
Productmethyl-accepting chemotaxis protein II 
Protein accessionYP_587740 
Protein GI94314531 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC TTGGTATTGG TGTACGCCTT GGCATCGGCT TCGGCGTGGT CTTGCTGTTG 
TCCACATTCA TGACGGTTCT GGGCGTGGTG CGTCTGGAAG ATGTCGCGGG CCGCACGCAC
GCGATGATGC AGCAGCCGCT CGCCAAGGAG CGCATCGTCA GCGACTGGTA TCGCCTGATG
TACGCCAGCG TGCGCCGTAC CACGGCCATC ACGCGCAGCA GCGACCCCTC GCTTGGCCAG
TTCTTCGCCG CCGAGACCAA AACCTCGGCC GAAACGATTG CCGCGATGCG CGACAAGATA
AAGCCGATGC TGACGTCCGA CGCGGAAAAG GCGGCCTTCG AGCGAATTCT GGTCGTACGC
AATCCCTACA ACGAGTCGCG CGACAAGATC GCCAAGCTAA AGCAGGACGG ACAGGCCGAG
GATGCCATCA AGGTGCTGGA GACCGAGTTC GTACCGGCCG GTGACGCCTA CCTGGTTGAG
ATCCAGAAGC TGTTGGACAT CCAGCGCACG TCCATCGACG CCACGGCCGA GGAGATCAAC
CGGATCTACG AGAGCGCGCG CAATGGGTTG ATTGCGCTTG GCGTGATTGC GTTGGCAATT
GGTGTGGCAT TCGCATGGTG GCTGACCATC GGCATCACGC GCCCGTTGCA TCGTGCCGTT
GGCTTTGCCC GGACCGTGGC CGCTGGCGAC CTGACCGGCC GCATCGACGT GGATAGCCGT
GACGAAACCG GCCAGCTCCT GGCGGCGTTG CGCGAGATGA ATGAGAACAT CCTTGGCATC
GTCAAGGAAG TGCGCAAAGG CACCGAGGCG ATTGCCACCG GCACGAGCCA GATTGCCGCC
GGCAATACCG ACCTTTCGCA ACGGACGGAA GAGCAGGCGT CGTCGCTGCA GGAGACCGCG
TCGAGCATGG AAGAACTGAC CAGCATCGTG CGCCAGAACG CTGACAGCGC GAAGCAGGCC
AGCGGTCTGG CGGTCAATGC CTCCGACGTG GCCACGCAGG GCGGCGAGGT CGTGGGCCAG
GTGGTGCACA CGATGGACGA GATCAATGCC GCCTCACGCA AGGTGGTCGA GATCATCTCG
GTGATTGAAG GCATCGCGTT CCAGACCAAC ATCCTGGCGC TGAACGCGGC AGTTGAAGCC
GCGCGCGCCG GGGAACAGGG CCGGGGCTTT GCCGTGGTGG CGGGCGAGGT GCGTAGCCTC
GCGCAGCGCA GCGCGACGGC GGCAAAGGAG ATCAAGTCAT TGATCGGAGA TTCGGCCGAT
CGCGTCGAAC GTGGCTCGCA ACTGGTGGCG CAGGCTGGCC AGACGATGGA AGAGATCGTC
AGCGCGGTGA AGCGCGTGAC CGACATCATG GGCGAAATCA GCGCGGCGTC GGTCGAGCAG
AGCGCCGGCA TCGAGCAGGT CAATCAGGCC GTGACGCAGA TGGACACCGT CACGCAGCAG
AACGCGGCGC TGGTGGAACA GGCTGCGGCG GCCGCGGGCT CGCTCGAAGA GCAGGCCCAG
CGGCTCAAGG AAGCGGTGGC GACGTTCCGC CTGGCCGCCT GA
 
Protein sequence
MKNLGIGVRL GIGFGVVLLL STFMTVLGVV RLEDVAGRTH AMMQQPLAKE RIVSDWYRLM 
YASVRRTTAI TRSSDPSLGQ FFAAETKTSA ETIAAMRDKI KPMLTSDAEK AAFERILVVR
NPYNESRDKI AKLKQDGQAE DAIKVLETEF VPAGDAYLVE IQKLLDIQRT SIDATAEEIN
RIYESARNGL IALGVIALAI GVAFAWWLTI GITRPLHRAV GFARTVAAGD LTGRIDVDSR
DETGQLLAAL REMNENILGI VKEVRKGTEA IATGTSQIAA GNTDLSQRTE EQASSLQETA
SSMEELTSIV RQNADSAKQA SGLAVNASDV ATQGGEVVGQ VVHTMDEINA ASRKVVEIIS
VIEGIAFQTN ILALNAAVEA ARAGEQGRGF AVVAGEVRSL AQRSATAAKE IKSLIGDSAD
RVERGSQLVA QAGQTMEEIV SAVKRVTDIM GEISAASVEQ SAGIEQVNQA VTQMDTVTQQ
NAALVEQAAA AAGSLEEQAQ RLKEAVATFR LAA