Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2354 |
Symbol | |
ID | 3961489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2590184 |
End bp | 2591848 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917171 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_523602 |
Protein GI | 89901131 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.547249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCG TCACTTTCAT GCGCCGCTTC ACCATCCGTT TTCGAATGTT AGGTGCCATT GCCATGGTGG CCATGGCCCT GTTGTTTATT GGCGCGATTG GTGTGGCGGC CCAGTTGTAT GCCAACTCCA TCGCGACCGA CCTGGTGGCG CGCGACATCA CTTCCCTGAC TGAACTTGCC CGCCTGCAAC AGGCCATGGG CAACGTGCGG CTGAATGAAA AAGAGATGAT CATTCAATAC GAGAACAGTG TGGAGGCCGC CAAATACAAG GAAGCCTGGA CGGCGTCATT TGCCCGGCTT GAAGCCTCTG CCAAGGCCCT TGCACCCCTG CTGCCGCAGG ATGCCCAACG CGCCGAACTG GCGCAAGTGG TGACGGGCAT GCAGCAATTT CGCACCGAAT TTGCACCCCT GGCCCAGCAG TTGGAGAGCC TGGCATTTCC GTCCGCGCAG GTCGCCTCGG CCACCATTGG CAAGCTGCAG CCGATTTACG ACAAAGCCAA CTCCACTTTG ACCACGCTGG CGACTGGACT GCAGCGCGCC ACCGAAACCA GCCAGGGCAA ATTGCAGAGC ACCGTCAACC AGGTCGTCTG GCTCATCGCC GGGGCCACCG GCGTCTTGCT GCTGGTGTTC ATCCCGTTGA CCATCTGGAA CATGAACGCC ATTTGTGTGC CCATCCTGAA GGCCGAGCAA GTCGCTCAGG ACATTGCCCA GGGCGATCTG ACCGACCATA ACGTTGACTG CCGCGGCAAC GACGAGGCCG CCCGGCTGTT ACGCTCCCTG GAGGCCATGC GCCAATCGCT GGGCCAACTG GTCGGCCAGG TGCGCATGTC AACCGACAGC ATCGCCACCG CCAGCGCCGA GATCGCATCC GGCAACCAGG ACCTGAGTGT GCGCACCGAG CAGACGGCCA GCAACTTGCA GCGCGCCGCC TCCCACATGG ACCAGCTGAC GCACACGGTG CAGCAGTCTG CCGATGCCTC GCGCCAGGCC AACCAACTCG CCTCGACGGC AGGCGACGTG GCGGCGCGCG GGGGTTCGGT CGTTTCGCAA GTGGTCAGCA CCATGAACGA CATCAACACG AGCTCCAAAA AAATCAGCGA CATCATCGGT GTCATTGACG GCATCGCCTT CCAGACCAAC ATCCTGGCCT TGAACGCCGC GGTGGAGGCC GCCCGCGCCG GTGAGCAAGG CCGTGGCTTT GCCGTGGTGG CAAGCGAGGT GCGCAGCCTG GCGGGCCGCT CGGCCGAGGC GGCCAAGGAA ATCAAGAGTT TGATCGGCGC CAGCGTCGAA CGCATCGAGA CCGGCTCGCG CTTGGTGACA GACGCCGGAA AAACCATGAC CGACATTGTG AATTCCGTGC AACGGGTGTC CGACATCATT GGCGAGATCA CCGGCGCAGC GGCCGAGCAA AGCCAGGGCA TTGGCGAAGT CAATACCGCA GTGGTGCAAC TCGACCAGAT GACGCAACAA AACGCCGCCC TGGTCGAACA ATCAGCCGCC GCCGCCGAGA GCCTGCGCGA GCAGGCCCAG CGCCTGGCTG AGGTGGTCGG CACCTTCAAA ATTCCGAGTT CCGGCGCTGG CAACCCGTCG CCCATGCTCC CGCGCGTCCA GCAGTCAACG CCCCCTCAGT TGTCAACACC CTCCCGGCTG TCATTGCGGG CGTGA
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Protein sequence | MQFVTFMRRF TIRFRMLGAI AMVAMALLFI GAIGVAAQLY ANSIATDLVA RDITSLTELA RLQQAMGNVR LNEKEMIIQY ENSVEAAKYK EAWTASFARL EASAKALAPL LPQDAQRAEL AQVVTGMQQF RTEFAPLAQQ LESLAFPSAQ VASATIGKLQ PIYDKANSTL TTLATGLQRA TETSQGKLQS TVNQVVWLIA GATGVLLLVF IPLTIWNMNA ICVPILKAEQ VAQDIAQGDL TDHNVDCRGN DEAARLLRSL EAMRQSLGQL VGQVRMSTDS IATASAEIAS GNQDLSVRTE QTASNLQRAA SHMDQLTHTV QQSADASRQA NQLASTAGDV AARGGSVVSQ VVSTMNDINT SSKKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRSL AGRSAEAAKE IKSLIGASVE RIETGSRLVT DAGKTMTDIV NSVQRVSDII GEITGAAAEQ SQGIGEVNTA VVQLDQMTQQ NAALVEQSAA AAESLREQAQ RLAEVVGTFK IPSSGAGNPS PMLPRVQQST PPQLSTPSRL SLRA
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