Gene Aave_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0035 
Symbol 
ID4666253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp38740 
End bp40416 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content69% 
IMG OID639821251 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_968426 
Protein GI120608748 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG ATTCGCTCAT GCGCGGGTTC ACCATCCGCG TCCGCATGCT GGGGGCCATC 
GCGGTCGTAC TGTCGCTGCT CGGGCTGCTG GGTGGGGCCG GCATGCTGGG CATGTTCCGC
ATCCACGCGA TGAGCGAGGA GTTCATCGGC CATTCCTTCT CGGAGGTCAG CGCCATGGCC
GAGCTGCGCG GCGAGATGGG CAACATCCGC CAGTACGAAA AGGACATGAT CATCCAGTAC
GAAAAGCCCG AGGGCGTGCA GAAGGCGCAC GCGGCCTGGC TGGAAAGCCT GGACCATGCC
AGGAAGGTGG CGGCGCGATT CCAGGACGGC GGGCAGGACA GGGACAACCA GCTCGCCACC
GACATCGTGA AGCGGCTCGA AGCCTACCGG GGCCAGTTCG CGAGCGTCGC GCGCCAGCTC
GAGGCCGGCG GCTACGACAG CGCCACCATC GCCAACCGCA TGAGCACCAA GGCCGTGGCG
GAATTCGCCG AGGCCGACAA GCTGCTCGCC CAATTGGACA GCGAGCTGCG CAAGGAGGTG
GCAGAGGTGA CCGCGCGCCA GCAGACCGTG TCCGAGCAGA CCAAGTGGCT GTTCGTGCTG
GCGGTGCTGA TCACCGTCGC GGTGGTGGTG CCGCTCACGC TGCTGAACAT GAATTCCATC
TGCCGCCCGC TGGTGGAGGC GCGCCGCATG GCCCAGGCCA TCGCTGGCGG CGACCTGTCG
CAGCGCATGC ACGTGGAAGG CCGTGACGAG GTGGCCGACC TGCAGCGCGC GCTGCTGGGC
ATGCAACAGG GCCTGAGCGC GCTCGTGTCG CAGGTGCGCG ATGCGAGCGG CAGCATCGCC
ACCGCGAGCC AGGAAATCGC CTCGGGCAAC CAGGACCTGT CGTCCCGCAC CGAGCAGACG
GCCAGCAACG CGCAGGAGGC CGTGGCCTCG CTGTCGCAAC TCACGGCCAC GGTGCAGCAG
ACGGCCTCGT CCTCGCAGGT GGCCAACCAG CTCGTCGCCT CCGCATCGGG CATCGCCACG
CGCGGCGGCA GCGTGGTGGA GCAGGCCGTG GCCAGCATGC ACGAGATCTC GGCCTCCAGC
CGCAAGATCG GCGACATCAT CGGCCTGATC GATTCCATCG CCTTCCAAAC CAATATCCTG
GCGCTGAATG CAGCCGTGGA AGCAGCGCGT GCCGGCGAAC AGGGCCGCGG CTTCGCCGTG
GTGGCCGGCG AAGTGCGCAG CCTCGCGCAG CGCAGCGCCC AGGCGGCCAG CGAGATCAAG
GGCCTCATCA GCTCCAGCGT GACGGCCGTG AACGGCGGCG TGCGCCACGT GGAGGACGCC
GGCACCGCCA TGAAGGAGAT CGTGGAGAGC GTGCAGCGCG TGACCGACAT CATCGGCGAG
ATCAATTCCG CGTCCGCTGA GCAGTCCGCG GGCATCGGCC AGGTCAACGG CTCCGTGGGC
GAGATCGACC GCATGACCCA GCAGAACGCC GCGCTGGTGG AGCAGTCCGC CGCGGCCGCC
CAGTCCCTGC GCGAGCAGGC CGCGCGGCTG TCGCAGGTGG TGCAGCAGTT CCATCTGGAC
GATGCGGCGA CGGCAGGGGG CTATGGCATG GGAGCGTCCG GCTCCGCGTC TGCTTCTGGC
TACGGTGAAT CGGCGGCGCT GCCAGCCGGA GGGCGGACGG CGTTGCTGTC GGCTTGA
 
Protein sequence
MKFDSLMRGF TIRVRMLGAI AVVLSLLGLL GGAGMLGMFR IHAMSEEFIG HSFSEVSAMA 
ELRGEMGNIR QYEKDMIIQY EKPEGVQKAH AAWLESLDHA RKVAARFQDG GQDRDNQLAT
DIVKRLEAYR GQFASVARQL EAGGYDSATI ANRMSTKAVA EFAEADKLLA QLDSELRKEV
AEVTARQQTV SEQTKWLFVL AVLITVAVVV PLTLLNMNSI CRPLVEARRM AQAIAGGDLS
QRMHVEGRDE VADLQRALLG MQQGLSALVS QVRDASGSIA TASQEIASGN QDLSSRTEQT
ASNAQEAVAS LSQLTATVQQ TASSSQVANQ LVASASGIAT RGGSVVEQAV ASMHEISASS
RKIGDIIGLI DSIAFQTNIL ALNAAVEAAR AGEQGRGFAV VAGEVRSLAQ RSAQAASEIK
GLISSSVTAV NGGVRHVEDA GTAMKEIVES VQRVTDIIGE INSASAEQSA GIGQVNGSVG
EIDRMTQQNA ALVEQSAAAA QSLREQAARL SQVVQQFHLD DAATAGGYGM GASGSASASG
YGESAALPAG GRTALLSA