| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1601 |
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| Symbol | |
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| ID | 6162043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1699184 |
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| End bp | 1700656 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664355 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001790633 |
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| Protein GI | 171058284 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000628162 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGGCTC TTTTTTCGTT GTCCACAATC ATGAAAACAG CCACTGCACA GCCTCCCACC
ATCAACCATG ACGATCAGAT CGTGCTGGCC GGCATCGGCG CGACCCTGGC CGCAGCGCTG
GTCTACGCCA CCACGCTGGG TGGCGAGACC GGCCTGGTGG CGCTGATCGG CGCGGTGCTC
GCTGCGGCCA GTCTGGGCGT GGCAGTCGCG GCCAGCCGTG GCACGGCTGG CCGCATCCTG
CTGCCGGTGC TCGGCATGGC GATGGTGGCG CTGCTGATCC ACTCGGCGCG TGGCCGGGCC
GAGGCGCACT TCGCGGTGTT CGCCTTCCTG GCCGTGACGG TGGTCTATCG GGACTGGCGC
GCCGTGCTGG CGGCCGCCGC CGCGATCGCC GTGCACCACC TGAGCTTCAA CTACCTGCAG
GAGGCCGGCT GGGGCGCGAT CTGCTTCACC GATCCGGGCC TGGGCCGGGT GCTCGAACAC
GCCGCCTACG TGGTGGTCGA GGCCGCCGTG CTGATCCTGC TGGCGCGGCG CGCCCAGGCG
CAGGCCGATG CCGCCCAGGA GCTGAGCCGG CTGGCCGAGC GTCTGCTCGG CAGTGACGGC
TCGATCGACC TGAGCCACGC CCACGACCCG GTGCGCTGGG AGACATCACG CCAGGTGCAA
CTGATGCTGC AACGGGTCGA GGCGGTGCTG AGCTCGGTGG GGCAGGCGGC CGAACAGATC
CGCATCGCCA GCCGCGAGGT CGCCACCGGC AGCCAGGACC TGAGCCACCG CACCGAACAG
ACCGCCAGCA ACCTGCAGCA CACCGCCAGC GCGATGGTGC AGCTGACCGG CACGCTGCAG
CAGTCGGCCG ATTCGGCGCG CACCGCCAAC CAGCTCGCCG GCTCGGCAGC CAGCGTGGCA
CAGCGCGGCG GGGTGGTGGT CTCGCAGGTG GTCGACACCA TGAACGAGAT CAACACCAGC
TCGAAGAAGA TTGCCGACAT CATCGGCGTG ATCGACGGCA TCGCCTTCCA GACCAACATC
CTCGCGCTCA ACGCCGCGGT CGAAGCCGCC CGCGCCGGCG ATCAGGGCCG CGGTTTTGCG
GTCGTGGCCG GCGAGGTGCG CAACCTGGCG CAGCGCAGCG CCGGCGCCGC GCGCGAGATC
AAGGCGCTGA TCGGCGCCTC GGTCGATCGG GTCGAATCGG GCTCGCGCCT GGTGTCGGAT
GCGGGCTCGA CGATGGACGA GATCGTCGCC TCGGTGCAGC GGGTCTCGGC CATGATCGGC
GAGATCAGCG CGGCGTCTTC GCAGCAGAGC AGCGGCATCG GCCAGGTCAA CGGCTCGGTC
GCCCAGCTCG AATCGATGAC GCAGCAGAAC GCGGCGCTGG TCGAGGAAAG CGCGGCCGCC
TCCGAGAGCC TGCGCGAACA GGCGCAGCGC CTGACGGCGT CGATCAGCCT GTTCCGCCTG
GGTCGTGCGC CGCTCAGCGC CTTGCCGGGC TGA
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| Protein sequence | MRALFSLSTI MKTATAQPPT INHDDQIVLA GIGATLAAAL VYATTLGGET GLVALIGAVL
AAASLGVAVA ASRGTAGRIL LPVLGMAMVA LLIHSARGRA EAHFAVFAFL AVTVVYRDWR
AVLAAAAAIA VHHLSFNYLQ EAGWGAICFT DPGLGRVLEH AAYVVVEAAV LILLARRAQA
QADAAQELSR LAERLLGSDG SIDLSHAHDP VRWETSRQVQ LMLQRVEAVL SSVGQAAEQI
RIASREVATG SQDLSHRTEQ TASNLQHTAS AMVQLTGTLQ QSADSARTAN QLAGSAASVA
QRGGVVVSQV VDTMNEINTS SKKIADIIGV IDGIAFQTNI LALNAAVEAA RAGDQGRGFA
VVAGEVRNLA QRSAGAAREI KALIGASVDR VESGSRLVSD AGSTMDEIVA SVQRVSAMIG
EISAASSQQS SGIGQVNGSV AQLESMTQQN AALVEESAAA SESLREQAQR LTASISLFRL
GRAPLSALPG
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