| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2363 |
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| Symbol | |
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| ID | 6159751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2566850 |
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| End bp | 2568388 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665132 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001791393 |
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| Protein GI | 171059044 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGG GATTGAAGCT CTTGCTTGCG CCGCTGCTCA CCGCCGTGGT CGCCTTCGGC
GCCGGCCAGG CCACGGTCTG GCTCAACGCC CGCGACGCGG CGCACAACGA GGCCGTGCTG
TCGAGCCAGC TCGAGCTCTA CAAGACCGTC GACAGCGTCG GAGCCCAGCT GGCCCAGCTG
CATGCGGGTG TCTACCGCAC GGTCGCGCTG ATGGCCTCGC TCGACGACCA GCAGGTGCGC
GCCGCCCGCG ACGACCTGGC CCGGCAGCTC GACGGCGTCA AGCGCACGCT CACCCTCAGC
GCCGATGCCG ATGGCGCCGA CGCCCAGGTG CGCAGCGCCG TGGCCGAGGG CGGCCAGGCG
ATCGACAACT ACCTCAAGCA GTCCGACATG GCGATCGACC TCTCCGCGGT CGACCCCAAC
ACCGGCATTG CCGCGCTGCA GGGCGCCGAC GCCAGCTACA AGGTGCTGGC CACCTCGATG
GGCGCGCTGA TCGCCCACAT CGACGACCTG CGCAGCAGCG CCGCCGCCGC CAGTGCCCGC
AGCCAGCTGC GTAACAACCT GCTGCTTGCC GGCCTCGGGC TGCTCGCATC GGCTGCCACC
GTGGCGCTGG CCTGGCTGCA TCAACGGCGC TTCCTGGTCG ACCTGATCCA GGCCGGCGCG
GTCACCAACG CGGTGGCCTC TGGCGACCTG AGCGTGCGCG TGCACACCGA ACGCAGCGAC
GAAGTGGGCG ACCTGATGCG CCACATCGAC GGCATGGCCA CGCGGCTGGG TGCATCGGTC
GGCGCCGTGC TGGGCGCGGC CCGCTCGATC GAGACCTCGT CGGCCGAAAT CGCCGCCGGC
AACCACGATC TCAGCCAGCG CACCGAACAG ACCGCCAGCA GCCTGCAGCA GGCCGCCAGC
GCGATGGAAG AACTCAGCAG CACGGTGCAG CAGACGGCGG CCTCGGCGCA CAGCGCGCTG
CAGGTGGCCG CCACCGCCTC GGACGCCGCG GCCCGAGGCG GCCAGGTCGT CACCCGGGTG
GTGCAGACCA TGGATCACAT CAACGCGTCC AGCAAGAAGA TCGCCGACAT CATCGGCGTG
ATCGACTCGA TCGCCTTCCA GACCAACATC CTCGCGCTCA ACGCCGCGGT CGAAGCCGCC
CGCGCCGGCG AACAGGGCCG CGGCTTCGCC GTGGTGGCCA CCGAGGTGCG CAGCCTCGCC
GGCCGCTCGG CCGACGCTGC CCGCGAGATC AAGGGCCTCA TCAACGCCAG CGTCGAGACC
GTCAGCACCG GCGCCCGCCT GGTGGCCGAT GCCGGCAGCA GCATGGAAGA CATCGTCAAC
CACGTGCAAC GCGTCTCGTC CATGATCGGC GAGATCAGCG TGGCCACCCA GGAGCAGAGC
CAGGGCATCG CCCAGGTCAC CGCGACCGTC TCGCAGATCG ACCAGATGAC GCAGCGCAAC
GCCGCGCTGG TCGAACAAAG CGCCGCCGCG GCCAGCAGCC TGCACGAGCA GGGCGGGCAT
CTGGCGCAGG CGGTGGGGTA TTTCAGGTTG GCGGGTTGA
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| Protein sequence | MKLGLKLLLA PLLTAVVAFG AGQATVWLNA RDAAHNEAVL SSQLELYKTV DSVGAQLAQL
HAGVYRTVAL MASLDDQQVR AARDDLARQL DGVKRTLTLS ADADGADAQV RSAVAEGGQA
IDNYLKQSDM AIDLSAVDPN TGIAALQGAD ASYKVLATSM GALIAHIDDL RSSAAAASAR
SQLRNNLLLA GLGLLASAAT VALAWLHQRR FLVDLIQAGA VTNAVASGDL SVRVHTERSD
EVGDLMRHID GMATRLGASV GAVLGAARSI ETSSAEIAAG NHDLSQRTEQ TASSLQQAAS
AMEELSSTVQ QTAASAHSAL QVAATASDAA ARGGQVVTRV VQTMDHINAS SKKIADIIGV
IDSIAFQTNI LALNAAVEAA RAGEQGRGFA VVATEVRSLA GRSADAAREI KGLINASVET
VSTGARLVAD AGSSMEDIVN HVQRVSSMIG EISVATQEQS QGIAQVTATV SQIDQMTQRN
AALVEQSAAA ASSLHEQGGH LAQAVGYFRL AG
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