More than 300 homologs were found in PanDaTox collection
for query gene Lcho_2363 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_2363  methyl-accepting chemotaxis sensory transducer  100 
 
 
512 aa  989    Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  61.22 
 
 
554 aa  344  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  59.2 
 
 
589 aa  334  3e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  59.04 
 
 
594 aa  333  4e-90  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
584 aa  331  2e-89  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  61.62 
 
 
602 aa  329  6e-89  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
674 aa  327  2.0000000000000001e-88  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
674 aa  327  2.0000000000000001e-88  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  55.68 
 
 
558 aa  327  5e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  59.62 
 
 
622 aa  321  3e-86  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  52.19 
 
 
583 aa  320  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
508 aa  320  5e-86  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
550 aa  318  2e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  60.4 
 
 
567 aa  317  3e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  48.45 
 
 
550 aa  315  9e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
536 aa  315  9.999999999999999e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
591 aa  315  1.9999999999999998e-84  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  60.06 
 
 
591 aa  315  1.9999999999999998e-84  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  60.88 
 
 
550 aa  313  3.9999999999999997e-84  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
523 aa  313  4.999999999999999e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  60.54 
 
 
550 aa  311  1e-83  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  56.78 
 
 
561 aa  309  5.9999999999999995e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  58.62 
 
 
554 aa  308  1.0000000000000001e-82  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  56.31 
 
 
552 aa  308  2.0000000000000002e-82  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
589 aa  306  5.0000000000000004e-82  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  58.09 
 
 
520 aa  306  8.000000000000001e-82  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.17 
 
 
527 aa  305  9.000000000000001e-82  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
537 aa  304  3.0000000000000004e-81  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  60.07 
 
 
592 aa  303  4.0000000000000003e-81  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
596 aa  302  8.000000000000001e-81  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  58.12 
 
 
548 aa  301  2e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2086  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
653 aa  301  3e-80  Dickeya zeae Ech1591  Bacteria  normal  0.0240769  n/a   
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  52.6 
 
 
719 aa  299  8e-80  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  57.89 
 
 
514 aa  299  9e-80  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  54.91 
 
 
559 aa  299  1e-79  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_4294  methyl-accepting chemotaxis sensory transducer  54.38 
 
 
539 aa  298  1e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  56.7 
 
 
797 aa  297  3e-79  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  54.15 
 
 
542 aa  297  3e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
597 aa  296  5e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
635 aa  295  9e-79  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
653 aa  295  1e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
653 aa  295  1e-78  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  45.38 
 
 
551 aa  295  1e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3430  methyl-accepting chemotaxis sensory transducer  58.45 
 
 
584 aa  294  2e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
628 aa  294  2e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
630 aa  295  2e-78  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
659 aa  294  3e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  52.02 
 
 
562 aa  293  4e-78  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  48.01 
 
 
532 aa  293  4e-78  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4044  methyl-accepting chemotaxis sensory transducer  48.64 
 
 
644 aa  293  4e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000893288 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  58.06 
 
 
559 aa  293  4e-78  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2762  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
584 aa  293  5e-78  Acidovorax ebreus TPSY  Bacteria  normal  0.636912  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  50.42 
 
 
569 aa  293  6e-78  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  54.52 
 
 
516 aa  293  6e-78  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.48 
 
 
579 aa  292  1e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.06 
 
 
579 aa  291  2e-77  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
577 aa  291  2e-77  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  54.79 
 
 
556 aa  290  4e-77  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  56.27 
 
 
578 aa  290  5.0000000000000004e-77  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  56.79 
 
 
532 aa  290  5.0000000000000004e-77  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  55.71 
 
 
752 aa  290  5.0000000000000004e-77  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  46.04 
 
 
513 aa  289  7e-77  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.55 
 
 
584 aa  289  8e-77  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  54.94 
 
 
618 aa  289  8e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
433 aa  289  1e-76  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  47.84 
 
 
661 aa  288  1e-76  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5413  methyl-accepting chemotaxis sensory transducer  55.14 
 
 
464 aa  288  1e-76  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.723957 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.25 
 
 
514 aa  288  1e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  59.41 
 
 
621 aa  288  1e-76  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.25 
 
 
514 aa  288  1e-76  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
581 aa  288  1e-76  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  59.52 
 
 
515 aa  288  2e-76  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  54.88 
 
 
584 aa  288  2e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
572 aa  288  2e-76  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.41 
 
 
618 aa  288  2e-76  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.25 
 
 
514 aa  288  2e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  54.45 
 
 
556 aa  288  2e-76  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  56.79 
 
 
589 aa  288  2e-76  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  58.25 
 
 
514 aa  288  2e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  40.93 
 
 
584 aa  288  2e-76  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
585 aa  287  2e-76  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  55.02 
 
 
579 aa  287  2e-76  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1601  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
490 aa  287  2.9999999999999996e-76  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000628162 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
579 aa  287  2.9999999999999996e-76  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  59.09 
 
 
573 aa  287  2.9999999999999996e-76  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  55.75 
 
 
733 aa  287  2.9999999999999996e-76  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  54.76 
 
 
598 aa  287  4e-76  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
551 aa  287  4e-76  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.45 
 
 
578 aa  287  4e-76  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.89 
 
 
514 aa  286  5e-76  Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  57.58 
 
 
525 aa  286  5e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  56.45 
 
 
580 aa  286  5e-76  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  56.99 
 
 
705 aa  286  5.999999999999999e-76  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  50.15 
 
 
549 aa  286  5.999999999999999e-76  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  59.52 
 
 
680 aa  286  7e-76  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
548 aa  286  9e-76  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  54.29 
 
 
586 aa  286  9e-76  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  57.38 
 
 
615 aa  285  1.0000000000000001e-75  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  57.61 
 
 
595 aa  285  1.0000000000000001e-75  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.4 
 
 
608 aa  285  1.0000000000000001e-75  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
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