More than 300 homologs were found in PanDaTox collection
for query gene Bamb_4715 on replicon NC_008391
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  91.05 
 
 
514 aa  916    Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  70.04 
 
 
514 aa  704    Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_006349  BMAA1487  methyl-accepting chemotaxis protein  78.95 
 
 
494 aa  719    Burkholderia mallei ATCC 23344  Bacteria  normal  0.625343  n/a   
 
 
-
 
NC_009079  BMA10247_A0801  methyl-accepting chemotaxis protein  79.18 
 
 
514 aa  758    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0387  aerotaxis sensor receptor  79.18 
 
 
514 aa  758    Burkholderia pseudomallei 1106a  Bacteria  normal  0.0904499  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1814  aerotaxis receptor  79.18 
 
 
514 aa  758    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  91.63 
 
 
514 aa  933    Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  87.16 
 
 
514 aa  886    Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  78.21 
 
 
514 aa  786    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  91.25 
 
 
514 aa  945    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  77.04 
 
 
514 aa  800    Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_010515  Bcenmc03_4907  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  88.13 
 
 
514 aa  881    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3362  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  86.77 
 
 
514 aa  861    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.234118 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  91.25 
 
 
514 aa  954    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3003  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  88.33 
 
 
535 aa  881    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  91.05 
 
 
535 aa  948    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
514 aa  1040    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5363  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  88.33 
 
 
514 aa  881    Burkholderia cenocepacia HI2424  Bacteria  normal  0.0430629  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  91.44 
 
 
514 aa  956    Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0485  aerotaxis sensor receptor  79.18 
 
 
514 aa  758    Burkholderia pseudomallei 668  Bacteria  normal  0.537813  n/a   
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  98.44 
 
 
514 aa  1024    Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_008835  BMA10229_2118  methyl-accepting chemotaxis protein  79.18 
 
 
514 aa  758    Burkholderia mallei NCTC 10229  Bacteria  normal  0.333375  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  62.09 
 
 
583 aa  621  1e-176  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  60.54 
 
 
580 aa  600  1e-170  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  60.54 
 
 
580 aa  600  1e-170  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  60.54 
 
 
580 aa  600  1e-170  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  60.54 
 
 
580 aa  600  1e-170  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  60.7 
 
 
623 aa  593  1e-168  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  60.7 
 
 
583 aa  594  1e-168  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  60.7 
 
 
669 aa  591  1e-167  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  53.58 
 
 
506 aa  531  1e-149  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  53.11 
 
 
506 aa  529  1e-149  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
CP001509  ECD_02941  fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component  52.62 
 
 
506 aa  526  1e-148  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.62 
 
 
506 aa  526  1e-148  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02891  hypothetical protein  52.62 
 
 
506 aa  526  1e-148  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.92 
 
 
506 aa  527  1e-148  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3253  aerotaxis receptor  52.62 
 
 
506 aa  526  1e-148  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3508  aerotaxis receptor  52.92 
 
 
506 aa  525  1e-148  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  54.09 
 
 
506 aa  527  1e-148  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  52.92 
 
 
506 aa  526  1e-148  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
NC_011080  SNSL254_A3477  aerotaxis receptor  53.49 
 
 
506 aa  523  1e-147  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1802  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.79 
 
 
515 aa  523  1e-147  Dickeya zeae Ech1591  Bacteria  normal  0.0853497  n/a   
 
 
-
 
NC_011083  SeHA_C3511  aerotaxis receptor  53.49 
 
 
506 aa  523  1e-147  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00000000402751 
 
 
-
 
NC_011149  SeAg_B3403  aerotaxis receptor  52.91 
 
 
506 aa  519  1e-146  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3407  aerotaxis receptor  53.1 
 
 
506 aa  521  1e-146  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3573  aerotaxis receptor  52.91 
 
 
506 aa  519  1e-146  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0352648  normal  0.227962 
 
 
-
 
NC_012880  Dd703_3127  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.62 
 
 
515 aa  521  1e-146  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0805  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.84 
 
 
511 aa  508  1e-143  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.13 
 
 
526 aa  506  9.999999999999999e-143  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  52.13 
 
 
526 aa  506  9.999999999999999e-143  Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  52.13 
 
 
526 aa  506  9.999999999999999e-143  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3559  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.68 
 
 
511 aa  497  1e-139  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0839  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.9 
 
 
511 aa  493  9.999999999999999e-139  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3399  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.93 
 
 
511 aa  488  1e-136  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.9 
 
 
598 aa  484  1e-135  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.57 
 
 
517 aa  468  9.999999999999999e-131  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  50.38 
 
 
552 aa  458  1e-127  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_012880  Dd703_1744  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.42 
 
 
517 aa  455  1e-127  Dickeya dadantii Ech703  Bacteria  normal  0.514978  n/a   
 
 
-
 
NC_012917  PC1_2293  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.81 
 
 
517 aa  455  1.0000000000000001e-126  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2593  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.53 
 
 
517 aa  452  1.0000000000000001e-126  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_012912  Dd1591_1779  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.63 
 
 
517 aa  452  1.0000000000000001e-126  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  48.39 
 
 
549 aa  451  1e-125  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.72 
 
 
551 aa  447  1.0000000000000001e-124  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.59 
 
 
556 aa  439  9.999999999999999e-123  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  47.28 
 
 
557 aa  437  1e-121  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.88 
 
 
566 aa  436  1e-121  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.87 
 
 
566 aa  435  1e-120  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.15 
 
 
519 aa  430  1e-119  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  44.19 
 
 
511 aa  429  1e-119  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.11 
 
 
579 aa  427  1e-118  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.6 
 
 
550 aa  428  1e-118  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  47.12 
 
 
565 aa  420  1e-116  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  47.36 
 
 
519 aa  419  1e-116  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.28 
 
 
543 aa  417  9.999999999999999e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.98 
 
 
575 aa  413  1e-114  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.91 
 
 
519 aa  405  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.61 
 
 
529 aa  392  1e-107  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.61 
 
 
529 aa  392  1e-107  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  45.75 
 
 
529 aa  385  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  43.69 
 
 
567 aa  384  1e-105  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.34 
 
 
520 aa  381  1e-104  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2452  PAS  41.67 
 
 
518 aa  346  7e-94  Ralstonia eutropha JMP134  Bacteria  normal  0.952184  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
584 aa  326  6e-88  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  60.87 
 
 
520 aa  323  6e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  54.37 
 
 
589 aa  319  9e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_010002  Daci_1684  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.72 
 
 
525 aa  317  3e-85  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  58.58 
 
 
622 aa  317  4e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  58.05 
 
 
594 aa  315  9e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
674 aa  312  9e-84  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
674 aa  312  1e-83  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  56.21 
 
 
554 aa  309  9e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  65.74 
 
 
597 aa  308  1.0000000000000001e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  57.42 
 
 
591 aa  308  2.0000000000000002e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  57.42 
 
 
591 aa  308  2.0000000000000002e-82  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
635 aa  306  4.0000000000000004e-82  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  55.85 
 
 
567 aa  305  1.0000000000000001e-81  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  56.86 
 
 
550 aa  305  1.0000000000000001e-81  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
598 aa  304  2.0000000000000002e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  56.52 
 
 
550 aa  302  8.000000000000001e-81  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  55.88 
 
 
536 aa  302  9e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
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