More than 300 homologs were found in PanDaTox collection
for query gene Lcho_4044 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_4044  methyl-accepting chemotaxis sensory transducer  100 
 
 
644 aa  1265    Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000893288 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  46.33 
 
 
642 aa  451  1e-125  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  45.27 
 
 
653 aa  417  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  45.27 
 
 
653 aa  417  9.999999999999999e-116  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
659 aa  404  1e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  54.69 
 
 
589 aa  357  3.9999999999999996e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  64.01 
 
 
622 aa  356  8.999999999999999e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  62.08 
 
 
559 aa  353  5.9999999999999994e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  55.32 
 
 
569 aa  352  1e-95  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  53.53 
 
 
549 aa  344  2e-93  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  62.3 
 
 
520 aa  344  2e-93  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  57.1 
 
 
572 aa  343  7e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  58.46 
 
 
596 aa  343  8e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  50.37 
 
 
543 aa  342  1e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  64.61 
 
 
525 aa  341  2.9999999999999998e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  58.64 
 
 
542 aa  339  9.999999999999999e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  58.58 
 
 
578 aa  337  5.999999999999999e-91  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  56.67 
 
 
583 aa  336  7.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  60 
 
 
597 aa  335  1e-90  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  56.51 
 
 
527 aa  335  2e-90  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  48.88 
 
 
580 aa  335  2e-90  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  56.79 
 
 
537 aa  333  8e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  58.54 
 
 
584 aa  332  1e-89  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
591 aa  332  1e-89  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
591 aa  332  1e-89  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  61.18 
 
 
471 aa  332  2e-89  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  60 
 
 
650 aa  331  2e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  53.62 
 
 
513 aa  330  5.0000000000000004e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
513 aa  328  1.0000000000000001e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  56.85 
 
 
579 aa  328  1.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  61.18 
 
 
548 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  55.61 
 
 
598 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  61.36 
 
 
559 aa  328  2.0000000000000001e-88  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  58.72 
 
 
586 aa  328  3e-88  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
554 aa  328  3e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  56.89 
 
 
536 aa  327  5e-88  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  59.81 
 
 
556 aa  326  8.000000000000001e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  59.74 
 
 
592 aa  325  1e-87  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  54.25 
 
 
595 aa  325  2e-87  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
535 aa  324  3e-87  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2698  methyl-accepting chemotaxis protein I  37.88 
 
 
640 aa  324  3e-87  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  54.44 
 
 
585 aa  324  4e-87  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.33 
 
 
573 aa  323  5e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
579 aa  323  5e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
581 aa  323  7e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  58.1 
 
 
589 aa  323  9.000000000000001e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  57.94 
 
 
602 aa  322  9.999999999999999e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  51.51 
 
 
554 aa  322  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  56.46 
 
 
551 aa  321  1.9999999999999998e-86  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
594 aa  322  1.9999999999999998e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
532 aa  320  3e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  62.74 
 
 
516 aa  321  3e-86  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  58.36 
 
 
584 aa  320  3.9999999999999996e-86  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  56.39 
 
 
550 aa  320  3.9999999999999996e-86  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
584 aa  320  5e-86  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  58.74 
 
 
577 aa  320  7e-86  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  50 
 
 
553 aa  319  1e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  56.07 
 
 
550 aa  318  1e-85  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  55.95 
 
 
555 aa  318  1e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2819  methyl-accepting chemotaxis protein I  38.07 
 
 
640 aa  318  2e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  59.2 
 
 
525 aa  318  3e-85  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
433 aa  318  3e-85  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2892  putative methyl-accepting chemotaxis protein  37.58 
 
 
631 aa  317  4e-85  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0367136  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
537 aa  317  4e-85  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_009080  BMA10247_1709  putative methyl-accepting chemotaxis protein  37.58 
 
 
640 aa  317  5e-85  Burkholderia mallei NCTC 10247  Bacteria  normal  0.142382  n/a   
 
 
-
 
NC_006348  BMA0617  methyl-accepting chemotaxis protein, putative  37.58 
 
 
640 aa  317  5e-85  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2755  methyl-accepting chemotaxis protein  37.58 
 
 
640 aa  317  5e-85  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2395  putative methyl-accepting chemotaxis protein  37.58 
 
 
640 aa  317  5e-85  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  54.47 
 
 
620 aa  317  5e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  53.94 
 
 
394 aa  317  6e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
561 aa  316  9e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  55.31 
 
 
553 aa  316  9.999999999999999e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  54.35 
 
 
514 aa  316  9.999999999999999e-85  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.41 
 
 
579 aa  316  9.999999999999999e-85  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
635 aa  315  1.9999999999999998e-84  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  51.31 
 
 
649 aa  315  1.9999999999999998e-84  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  56.27 
 
 
552 aa  315  1.9999999999999998e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  51.31 
 
 
649 aa  315  1.9999999999999998e-84  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
532 aa  314  2.9999999999999996e-84  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1799  methyl-accepting chemotaxis protein  37.15 
 
 
640 aa  314  2.9999999999999996e-84  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  55.96 
 
 
587 aa  314  3.9999999999999997e-84  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  55.31 
 
 
540 aa  313  3.9999999999999997e-84  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
674 aa  313  4.999999999999999e-84  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  49.88 
 
 
589 aa  313  5.999999999999999e-84  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  56.57 
 
 
674 aa  313  6.999999999999999e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
548 aa  312  1e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  54.63 
 
 
580 aa  312  1e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  52.1 
 
 
628 aa  312  1e-83  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
557 aa  312  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  55.59 
 
 
540 aa  312  2e-83  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
575 aa  311  2e-83  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  54.04 
 
 
561 aa  311  2e-83  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_007908  Rfer_3286  methyl-accepting chemotaxis sensory transducer  55.76 
 
 
499 aa  311  2e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.729026  n/a   
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  59.48 
 
 
680 aa  311  2e-83  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  57.95 
 
 
567 aa  311  2e-83  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
557 aa  311  2.9999999999999997e-83  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  57.68 
 
 
557 aa  311  2.9999999999999997e-83  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  43.49 
 
 
555 aa  310  4e-83  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  57.68 
 
 
557 aa  310  5e-83  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  57.7 
 
 
615 aa  310  5e-83  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
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