More than 300 homologs were found in PanDaTox collection
for query gene Psyr_2682 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  100 
 
 
723 aa  1461    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  50.14 
 
 
740 aa  699    Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  50.21 
 
 
779 aa  696    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  38.94 
 
 
778 aa  486  1e-136  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  36.64 
 
 
713 aa  478  1e-133  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
731 aa  462  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  37.48 
 
 
706 aa  442  1e-123  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  36.6 
 
 
730 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
741 aa  439  9.999999999999999e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
730 aa  429  1e-119  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
699 aa  343  9e-93  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2023  methyl-accepting chemotaxis sensory transducer  39.41 
 
 
823 aa  319  9e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0346871  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  28.38 
 
 
713 aa  293  1e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  42.2 
 
 
702 aa  285  2.0000000000000002e-75  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  48.04 
 
 
676 aa  277  4e-73  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
716 aa  273  1e-71  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  26.99 
 
 
712 aa  271  2.9999999999999997e-71  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  27.12 
 
 
712 aa  271  4e-71  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.85 
 
 
636 aa  266  8.999999999999999e-70  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  43.8 
 
 
744 aa  260  5.0000000000000005e-68  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  42.9 
 
 
695 aa  259  1e-67  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  28.76 
 
 
695 aa  256  9e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.94 
 
 
667 aa  255  2.0000000000000002e-66  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
602 aa  255  2.0000000000000002e-66  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  42.66 
 
 
623 aa  254  3e-66  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.14 
 
 
665 aa  254  3e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  27.74 
 
 
712 aa  244  6e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  27.6 
 
 
714 aa  243  7e-63  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
649 aa  243  7e-63  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  28.34 
 
 
714 aa  243  7.999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  39.79 
 
 
740 aa  242  2e-62  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  27.03 
 
 
715 aa  239  1e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.39 
 
 
746 aa  238  4e-61  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  27.33 
 
 
714 aa  237  6e-61  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  27.18 
 
 
657 aa  236  9e-61  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  41.59 
 
 
706 aa  232  2e-59  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  26.13 
 
 
657 aa  231  4e-59  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.12 
 
 
785 aa  230  6e-59  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.37 
 
 
793 aa  229  2e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
661 aa  228  4e-58  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  27.03 
 
 
714 aa  224  4e-57  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  27.03 
 
 
714 aa  224  4.9999999999999996e-57  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  27.53 
 
 
688 aa  223  8e-57  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  39.07 
 
 
600 aa  223  8e-57  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  32.36 
 
 
741 aa  223  9.999999999999999e-57  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4943  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
571 aa  223  9.999999999999999e-57  Burkholderia phymatum STM815  Bacteria  normal  0.769292  normal 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  27.37 
 
 
778 aa  219  2e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  27.16 
 
 
688 aa  219  2e-55  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  26.94 
 
 
714 aa  217  5e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2794  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
717 aa  217  5.9999999999999996e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
796 aa  215  1.9999999999999998e-54  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  27.13 
 
 
688 aa  215  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
567 aa  214  2.9999999999999995e-54  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  27.3 
 
 
688 aa  214  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  27.6 
 
 
705 aa  209  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
749 aa  208  2e-52  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  27.65 
 
 
720 aa  207  4e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  26.4 
 
 
720 aa  207  5e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
832 aa  206  1e-51  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  26.5 
 
 
738 aa  205  2e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
759 aa  204  4e-51  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  29.57 
 
 
707 aa  203  9.999999999999999e-51  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  26.69 
 
 
720 aa  201  3e-50  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01109  methyl-accepting chemotaxis protein  28.7 
 
 
743 aa  197  6e-49  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566074  n/a   
 
 
-
 
NC_002967  TDE0640  methyl-accepting chemotaxis protein  26.35 
 
 
744 aa  196  1e-48  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  27.04 
 
 
706 aa  196  1e-48  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  26.28 
 
 
701 aa  187  4e-46  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
516 aa  187  4e-46  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0576  methyl-accepting chemotaxis sensory transducer  28.1 
 
 
688 aa  187  4e-46  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
706 aa  187  5e-46  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  27.65 
 
 
705 aa  187  6e-46  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
553 aa  187  8e-46  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  33.98 
 
 
527 aa  186  1.0000000000000001e-45  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007796  Mhun_1957  methyl-accepting chemotaxis sensory transducer  26.69 
 
 
837 aa  186  1.0000000000000001e-45  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
706 aa  186  1.0000000000000001e-45  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.29 
 
 
726 aa  184  3e-45  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0285  methyl-accepting chemotaxis sensory transducer  28.4 
 
 
711 aa  184  4.0000000000000006e-45  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  25.68 
 
 
728 aa  184  6e-45  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  26.93 
 
 
706 aa  183  9.000000000000001e-45  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  26.93 
 
 
706 aa  183  9.000000000000001e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  26.79 
 
 
706 aa  182  1e-44  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
540 aa  182  2e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  27.38 
 
 
706 aa  181  4e-44  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  27.16 
 
 
706 aa  181  4.999999999999999e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
540 aa  181  4.999999999999999e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
569 aa  180  7e-44  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0984  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
608 aa  179  2e-43  Ruegeria sp. TM1040  Bacteria  normal  0.0666136  normal  0.983928 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  34.2 
 
 
767 aa  178  3e-43  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  37.37 
 
 
554 aa  178  3e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008044  TM1040_2453  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
788 aa  177  4e-43  Ruegeria sp. TM1040  Bacteria  normal  0.925334  normal  0.122382 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  35.75 
 
 
617 aa  177  5e-43  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.23 
 
 
1170 aa  177  5e-43  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  27.55 
 
 
695 aa  177  7e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
553 aa  177  8e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
555 aa  176  9.999999999999999e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  25.34 
 
 
728 aa  176  9.999999999999999e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
621 aa  176  1.9999999999999998e-42  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  24.86 
 
 
705 aa  176  1.9999999999999998e-42  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  26.66 
 
 
706 aa  176  1.9999999999999998e-42  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  37.15 
 
 
657 aa  175  2.9999999999999996e-42  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
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