Gene Cphy_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0285 
Symbol 
ID5744208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp354430 
End bp356565 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content37% 
IMG OID641291375 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001557411 
Protein GI160878443 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA AGATGGTGGA GAAATTAAGT CACAAGAGCT TGGCGAAAAG GATTTCCTTT 
CTGGTTACTA AACTTTTAGC TGTCGTATTT ATTTTATTTA TTGTGGTATC CTCATTGATT
TCTGGTCTAT CAATTGAAAA ATCTATAAGA GGTGAAGTTT CTGTATTATC AGAAAAAAAT
GCACTAAAGG TGCAAGGGAT ATTTGATGAT GCAAGTAGCG TTGCAGACAT TATTTTAACC
TATGTGGAAA AACAATATGT TCATGATTCG ACATTATCGG CCCAAGAGAA GTTACCGATC
TATCAGGGAC AGGTATATGA TGATAAATTG ACAAAGACTG ATTATGAGAC CGAGAAATTT
ATCATAGATA TTGCAAAAAG TTCAATTATT AATTATCCAA CAATTACTGG TGTTGGAATT
ATGTTTGAAC CATATGAATT TAATTCTAAG ATTAAAAACT ATAGCATCTA CATAAAGCGA
GGATATCTGG AAGCAAAACC TGGGTCATAT GGTGATTACG ATAAATACTC CATACAACCT
TATTTTACCG AGGCAAAATC TAGCTTAAAA CCTGTTTTTA CTGACCCTCA AGATTATAAT
GGAGTTACTT TTATATCTGC TGCCTATCCA ATTGTTTTGG ATGGAGTTTT TAAAGGGGTT
ATCGTTGTTG ATATTGATAT TGCTAATTTT AATGAGTTAG AGATTCATAA TGATAATTAT
ACTAGCATGT ATAGTACTGT TTATACTCCG GATGGTTTAA TAGTCTACGA TAGTGAATCT
CATGTAGAAG AAGGGGAAGA TTTATCGAAT TTCTTGGCAA GTGAAAAAGA CTATAATACG
ATTTTACAAA AGTTTGAAGG TGAAGAAGCA TTTACGATTC ATACAAAACG AAAAGATGGC
GGAAGCGAAA CTCGATTCTT GTATCCAATC CAAGCAGGTA GTGAACGTTG GTGGGCACAG
ACAGCGATAA GTCAGTTGGA TATGTATAAG AGTGTAATTG TTACTGTAGT TGTACTAACT
GTATTTACTT TAGCAGGGCT TCTTGTCATT GTTTTCTTAG TGTCAAGAGC GATGAAAAAG
AGGTTAGCAC CGATTCAAGG GATTGTCAAT TCTGCTGAAA AAATAGCAAA AGGCGAATTT
GATATTGTAG CGGAGTATAA GGAGGATGAT GAGATTGGAA AGCTAGCCAG ATCATTTGCC
AATACAGCAA ATACGCTAAA TCTCATTATT GATGATATCA ATTATTTACT TAATGAAATG
GCAAGCGGAA ACTTTGTAAT TGAATCCTCC TGTACAGAGA ACTATGTTGG TGGATTTCAG
CCAATTCTAA AATCAGTGGG GCATATTAAT CGTCAATTAA GTAACACGTT ACATGAAATT
AACGAGGCAG CTGATCAGGT AGCAACGGCT TCTAGCGCAA TGGCGGATGG TTCAAGTTCT
TTGGCCGAAG GATGTACAGA CCAAGCAAGT TCCGTAGAGG AGTTGGTTGC AACAATAACA
AGTTTGGAAA ATGATATTGA TGAGAATACA AATAAAACAA TAGAAGCTAG TAAGAAGATG
CAACTAATTG GTGAAACAGC TCAGGAAAGC GGAGCTAAGA TGAATGAATT GACACTCGCT
ATGGAGAAAA TAAGCCAAAG CTCTGGACAG ATTGCTGAAA TTATTACTAC GATTGAAGGC
ATTGCAGAGC AAACAAATCT ATTATCCTTA AATGCAGCCA TCGAAGCAGC AAGAGCTGGT
GAAGCTGGTA GAGGATTTAC TGTTGTGGCA GAGGAGATTC GAAAGTTAGC AAATCAAAGT
GCTCTAGCAG TTCAATCAAC AAGAGAATTA ATAGTAACAG CGCTTAGCGA GATAGAAAGT
GGAAATGAAA TCACTAGCCA GACCAGTGAA TCATTACAAC AAGTAGAGGT TGGAGTTAAA
GAAGCAATTG CATTAGCAGA AGGCTCCAAG GACGCTTCTA TATCACAAGC ACAAGCAATG
AGAGAAATAA CCTCTGTCGT AGAACAGATA TCCGTTGTTG TGCAGAATAA CTCTGCTACA
GCAGAAGAAA GCTCCGCAAC AAGCGAGGAA CTCTCAGCGC AAGCACAAAC ATTGGCGGAC
TTAGTTGGTA GATTTAAGCT TCGAGAAGAC TTATAA
 
Protein sequence
MKRKMVEKLS HKSLAKRISF LVTKLLAVVF ILFIVVSSLI SGLSIEKSIR GEVSVLSEKN 
ALKVQGIFDD ASSVADIILT YVEKQYVHDS TLSAQEKLPI YQGQVYDDKL TKTDYETEKF
IIDIAKSSII NYPTITGVGI MFEPYEFNSK IKNYSIYIKR GYLEAKPGSY GDYDKYSIQP
YFTEAKSSLK PVFTDPQDYN GVTFISAAYP IVLDGVFKGV IVVDIDIANF NELEIHNDNY
TSMYSTVYTP DGLIVYDSES HVEEGEDLSN FLASEKDYNT ILQKFEGEEA FTIHTKRKDG
GSETRFLYPI QAGSERWWAQ TAISQLDMYK SVIVTVVVLT VFTLAGLLVI VFLVSRAMKK
RLAPIQGIVN SAEKIAKGEF DIVAEYKEDD EIGKLARSFA NTANTLNLII DDINYLLNEM
ASGNFVIESS CTENYVGGFQ PILKSVGHIN RQLSNTLHEI NEAADQVATA SSAMADGSSS
LAEGCTDQAS SVEELVATIT SLENDIDENT NKTIEASKKM QLIGETAQES GAKMNELTLA
MEKISQSSGQ IAEIITTIEG IAEQTNLLSL NAAIEAARAG EAGRGFTVVA EEIRKLANQS
ALAVQSTREL IVTALSEIES GNEITSQTSE SLQQVEVGVK EAIALAEGSK DASISQAQAM
REITSVVEQI SVVVQNNSAT AEESSATSEE LSAQAQTLAD LVGRFKLRED L