| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3030 |
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| Symbol | |
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| ID | 4811102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3553462 |
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| End bp | 3555960 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640108451 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001039419 |
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| Protein GI | 125975509 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00284544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAGCA AAATGAATTT GACAACAAAA ATGATGGTGT TTATCGGTAC TGTTACTGCT
ATAGCTTTAG CAGCAACAAT TATTATAAGT TATGTATTAT CAAGTAATAT GGCAATAGAA
GAGGGATTTG CAAAAGTGGA AGAAATGGCT TACAGATACA GCAATGAAGT AAAAGCGGAG
ATAGAACTTC CCCTCGACAC TGCCAGGACT TTGGCTCAAA CTTTTGAGGC AATGAGAGCT
ACGAGTACTC CTGACAGAGA TGTAATGAAC AGTATATTAA GAAATGTATT GGAGAAGGAA
GAGCGTTTTA ATGGAGTATG GACATTGTGG GAACCCAATG CCCTTGACGG CAAGGACGCA
GAGTATGCCG GAAAACCGGG ATATGACGAA ACAGGAAGGT TTTTGCCTCT TTGGAACAGA
GATACGGGTA CCATACAGCA AGTCGCGATA GTTGACTATG AGACGGGAGA TTTTTATAAT
CTTCCGAAGC AAACCGGTGA GGAAACCGTT ACAAATCCCT ACCTTTATCC GGTTAACGGC
GAATATGCTC CCATGTCGAG CATTGTTGTT CCTATAAAAT ACAATGGTCA GTTTGTAGGA
GTTGCAGGAG TTGACGTTAT TTTGAGCACT TTCCAGGACA AGGTCGTAAA AATAAGACCC
TATGAAAGAG GGTATGCATC GCTTGTTTCC AACGACGGTG TATATGTTGC GGACATAAAC
GAAGAAAATA TTTTTACACC GATAGCTGAC GAGAAAGCTA AGGCTGCAAT AAAGAACGGC
GAGGTATATA CTACTACGGA ATATTGTGAA ATATTAAAGG AAGAGGTTTA TAAGGTTTAT
GTTCCAATAA AGTTTGGAAA TACAAAGACT CCATGGTCTT TTGTCGTAAC GGCTCCAATG
AGCAAAGTTA TGGAAAAGGC CAATATGATT AGAAATGCAT CATTAATTTT AGGAATTGTC
GCGTTGGCAA TATTGCTGGT TATTATTTTC TTTATCACGA GAAGTGTTGT AGGCCCAATT
AAGGAGCTTA CCAATGTTGC CGAAAAGATA GCGGAAGACA ATCTTTCAAC GGAAATAAAC
ATAATTAAAA CTCAGGATGA AGTTGGCAAC TTGTCAAGAG CGTTCCATAA AATGCAGCAA
AACCTGAGAG ACATTGCCCA TACGGCAGAA AAAATAGCCC AGGGCGATTT GTCGGATGAC
AGGATATTGA AAGAAGACGG AAAGCAGGCC GGAGATTTGA CAGGGGCTTT CAATGTGATG
GTGACAAACT TGAAACAGTT GAAAAATGAA ATTGATTCGA TAACGATGGC AGTTGAAGAA
GGTAAACTTG GCGTAAGAGG AAACGAGGAA GCATTCAAGG GTGGATGGAA GGAGCTGCTG
AAAGGCATAA ACAAGACTCT TGATGCTGTG ATTGCGCCTA TTAGGGAAGC TTCCCTTGTT
TTACAGGAAG TTGCAAAAGG TAATTTAAAT GTCGCTGTGA CAGGAGACTA CAAAGGAGAG
AATGCCATAA TAAAAGACAA TTTGAACATG ACTATCGACA ATATTAACCA GATACTCTGG
GAGGTAACGG CGGCTGCCGA ACAGGTGGCA TCAAGCTCAA GACAAGTGGC GGTATCGAGT
GAGTCACTGT CTCAGGGAGC TACGGAGCAG GCAAGTACAA TAGAAGAAAT AACATCATCG
ATGGAGCAGA TAGCAGCCCA AACCAAGCAA AATGCAATAA ATGCAAACAA AGCAAGTGAA
CTGGCATTAA GTGTGAAGAA CAATGCCATC CAGGGTAAAA GTCATATGGA AGACATGCTT
GTATCGATGC AGAATATAAA TAAATCATCA TCGGATATTT CAAGGATAAT CAAGGTAATA
GATGATATTG CGTTCCAGAC AAATATATTG GCACTGAATG CGGCAGTGGA GGCTGCAAGA
GCCGGACAGC ACGGAAAAGG ATTTGCAGTT GTTGCGGAAG AGGTCAGAAA CCTGGCTGAA
AGAAGTGCCA GAGCGGCAAG GGAAACCACC GAAATGATAG AAAGTTCTAT AAGAACTGTG
GAAACCGGAA CTAAAATTGC ACATGAAACC GCAGAGGCGT TGAACAAAAT AGTCGACGGT
GTAACGGAAA CGTCTGCGTT GGCGGAAGAA ATAGCTTCAG CATCCAAAGA ACAAGATTTG
GGAATTTCAC AGGTAAATCA GGCAATATCC CAAGTTGCGG AAGTAATACA TGCAAACTCT
GTGGAGGCGG AAGAAAGTGC ATCTGCCAAT GAGGAACTGT CAAAGCAGGC AAATATGTTG
AAAGAATCCT TAAGTAGATT CAAGCTAAAG CCAAATTCTT CGGAAGCATC AAAGGTTGAC
AGTATAAGGC CTGAAGTGAT GCGAATGCTT GAGGATATGG TTGAGAAAAA AATGAGTTCC
CACCATTTGG ATGAGTCAAA GCATAAAGGA AAAGGGAACA AGGAACCTGA GACAAAAGCT
CAAATATTGC TGGACAACAA AGAGTTTGGC AAGTATTGA
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| Protein sequence | MISKMNLTTK MMVFIGTVTA IALAATIIIS YVLSSNMAIE EGFAKVEEMA YRYSNEVKAE
IELPLDTART LAQTFEAMRA TSTPDRDVMN SILRNVLEKE ERFNGVWTLW EPNALDGKDA
EYAGKPGYDE TGRFLPLWNR DTGTIQQVAI VDYETGDFYN LPKQTGEETV TNPYLYPVNG
EYAPMSSIVV PIKYNGQFVG VAGVDVILST FQDKVVKIRP YERGYASLVS NDGVYVADIN
EENIFTPIAD EKAKAAIKNG EVYTTTEYCE ILKEEVYKVY VPIKFGNTKT PWSFVVTAPM
SKVMEKANMI RNASLILGIV ALAILLVIIF FITRSVVGPI KELTNVAEKI AEDNLSTEIN
IIKTQDEVGN LSRAFHKMQQ NLRDIAHTAE KIAQGDLSDD RILKEDGKQA GDLTGAFNVM
VTNLKQLKNE IDSITMAVEE GKLGVRGNEE AFKGGWKELL KGINKTLDAV IAPIREASLV
LQEVAKGNLN VAVTGDYKGE NAIIKDNLNM TIDNINQILW EVTAAAEQVA SSSRQVAVSS
ESLSQGATEQ ASTIEEITSS MEQIAAQTKQ NAINANKASE LALSVKNNAI QGKSHMEDML
VSMQNINKSS SDISRIIKVI DDIAFQTNIL ALNAAVEAAR AGQHGKGFAV VAEEVRNLAE
RSARAARETT EMIESSIRTV ETGTKIAHET AEALNKIVDG VTETSALAEE IASASKEQDL
GISQVNQAIS QVAEVIHANS VEAEESASAN EELSKQANML KESLSRFKLK PNSSEASKVD
SIRPEVMRML EDMVEKKMSS HHLDESKHKG KGNKEPETKA QILLDNKEFG KY
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