More than 300 homologs were found in PanDaTox collection
for query gene Cthe_3030 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  100 
 
 
832 aa  1694    Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
600 aa  435  1e-120  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
759 aa  436  1e-120  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
843 aa  358  1.9999999999999998e-97  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  33 
 
 
706 aa  338  2.9999999999999997e-91  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  53.78 
 
 
623 aa  330  7e-89  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  53.99 
 
 
567 aa  316  9.999999999999999e-85  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  30.45 
 
 
778 aa  298  2e-79  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  51.92 
 
 
370 aa  292  2e-77  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.68 
 
 
793 aa  288  2e-76  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  50.6 
 
 
602 aa  288  4e-76  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
649 aa  285  3.0000000000000004e-75  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  26.99 
 
 
796 aa  283  1e-74  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_002939  GSU1140  methyl-accepting chemotaxis protein  38.64 
 
 
727 aa  280  7e-74  Geobacter sulfurreducens PCA  Bacteria  normal  0.664897  n/a   
 
 
-
 
NC_007796  Mhun_1957  methyl-accepting chemotaxis sensory transducer  30 
 
 
837 aa  273  9e-72  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  27.18 
 
 
720 aa  273  1e-71  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  57.38 
 
 
740 aa  271  4e-71  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0354  methyl-accepting chemotaxis sensory transducer  27.23 
 
 
814 aa  271  5e-71  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.261611 
 
 
-
 
NC_013739  Cwoe_0996  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.11 
 
 
823 aa  266  2e-69  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
516 aa  266  2e-69  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.16 
 
 
746 aa  264  4.999999999999999e-69  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  43.81 
 
 
744 aa  263  8.999999999999999e-69  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  46.67 
 
 
702 aa  258  4e-67  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  32.51 
 
 
753 aa  258  4e-67  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  50.34 
 
 
740 aa  256  9e-67  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007517  Gmet_2423  methyl-accepting chemotaxis sensory transducer  33.28 
 
 
740 aa  253  7e-66  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  43.99 
 
 
695 aa  253  8.000000000000001e-66  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  43.04 
 
 
779 aa  253  1e-65  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
755 aa  253  1e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  32.81 
 
 
752 aa  251  3e-65  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  26.26 
 
 
778 aa  249  2e-64  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  27.76 
 
 
720 aa  248  4e-64  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  46.15 
 
 
706 aa  245  3e-63  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2992  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
733 aa  245  3e-63  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
740 aa  242  2e-62  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  25.64 
 
 
728 aa  240  6.999999999999999e-62  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  49.69 
 
 
676 aa  240  1e-61  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.44 
 
 
726 aa  238  3e-61  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  26.56 
 
 
741 aa  238  4e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  32.12 
 
 
733 aa  238  4e-61  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
610 aa  237  9e-61  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  26.03 
 
 
749 aa  236  1.0000000000000001e-60  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  31.57 
 
 
705 aa  233  1e-59  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
905 aa  231  3e-59  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
905 aa  231  5e-59  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.66 
 
 
1123 aa  231  6e-59  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  39.11 
 
 
767 aa  230  7e-59  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  25.47 
 
 
728 aa  229  2e-58  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  39.44 
 
 
792 aa  229  2e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_012918  GM21_1294  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
686 aa  228  3e-58  Geobacter sp. M21  Bacteria  n/a    hitchhiker  4.66893e-19 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  30.71 
 
 
745 aa  228  3e-58  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  46.88 
 
 
741 aa  228  4e-58  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  41.95 
 
 
908 aa  227  7e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  36.46 
 
 
678 aa  227  8e-58  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.18 
 
 
864 aa  224  4e-57  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3799  methyl-accepting chemotaxis sensory transducer  34.71 
 
 
772 aa  224  4.9999999999999996e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.79 
 
 
863 aa  224  7e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
661 aa  223  9e-57  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  37.68 
 
 
860 aa  221  3e-56  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
707 aa  221  5e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.58 
 
 
954 aa  220  7.999999999999999e-56  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  37.47 
 
 
962 aa  220  8.999999999999998e-56  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  36.78 
 
 
775 aa  219  1e-55  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
706 aa  219  2e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_011769  DvMF_1209  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
659 aa  217  8e-55  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.261932 
 
 
-
 
NC_010814  Glov_1735  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
868 aa  217  9e-55  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
793 aa  216  9.999999999999999e-55  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  42.68 
 
 
569 aa  215  1.9999999999999998e-54  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2361  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
652 aa  216  1.9999999999999998e-54  Desulfovibrio vulgaris DP4  Bacteria  normal  0.128072  normal  0.188082 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  30.82 
 
 
691 aa  216  1.9999999999999998e-54  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.76 
 
 
667 aa  214  4.9999999999999996e-54  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  29.18 
 
 
648 aa  213  1e-53  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_008609  Ppro_1601  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
1500 aa  213  1e-53  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  41.08 
 
 
566 aa  212  2e-53  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_011989  Avi_3947  methyl-accepting chemotaxis protein  40.67 
 
 
619 aa  212  2e-53  Agrobacterium vitis S4  Bacteria  normal  0.412994  n/a   
 
 
-
 
NC_011146  Gbem_2944  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
780 aa  212  2e-53  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  35.1 
 
 
797 aa  212  3e-53  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
823 aa  212  3e-53  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0729  PAS  38.51 
 
 
945 aa  211  4e-53  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.35 
 
 
701 aa  211  4e-53  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
579 aa  211  4e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  41.49 
 
 
557 aa  211  5e-53  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
554 aa  210  8e-53  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  41.18 
 
 
557 aa  209  1e-52  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
583 aa  209  1e-52  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
557 aa  209  1e-52  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2945  methyl-accepting chemotaxis sensory transducer  31.91 
 
 
780 aa  209  1e-52  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
520 aa  209  1e-52  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_007493  RSP_0044  putative cytoplasmic chemoreceptor, TlpT  36.28 
 
 
567 aa  209  2e-52  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0134213  n/a   
 
 
-
 
NC_009049  Rsph17029_1679  methyl-accepting chemotaxis sensory transducer  36.28 
 
 
567 aa  209  2e-52  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00756362  hitchhiker  0.00632021 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  40.72 
 
 
578 aa  208  3e-52  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
554 aa  208  4e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  42.3 
 
 
559 aa  208  4e-52  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  23.55 
 
 
941 aa  207  5e-52  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  40.54 
 
 
520 aa  207  5e-52  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
677 aa  207  6e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.32 
 
 
665 aa  207  7e-52  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  39.48 
 
 
551 aa  207  8e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.5 
 
 
636 aa  207  8e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
585 aa  207  8e-52  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
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