| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3088 |
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| Symbol | |
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| ID | 4477804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 3702013 |
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| End bp | 3704133 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639727692 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_870718 |
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| Protein GI | 117921526 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0193815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00820004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCATT TGTCCATCAG TACTAAGTTG TTGTGGATCA CTTCCGCCTT ATTCCTCTCA
ATTGTTGCCA TTCTTTCCAT CAGCCTCTGG TGGACCCTTT CGGATCAAAA CACAGAGCTG
TCTAATCAGG TTCAAGAGAC ATTACAAACC GAAACCCGTG ACAAACTCGA AGCCCGTGCG
GGCGAATATG GTGAAATGGT GGCGGGCTTT ATCAATGAAG CCTATCGGAT CCCGTACTCT
TTTTCCGGCA TGTTAGAGAG CACTGCGGAA GAGTTGCCAT TAAAGCGTGA TCGCTTAGAG
CTGGCCGTGG CGGCGGTATT AAAGAAAAAT AACCAGATAT CCTCCATGTA CGCGCAGTTT
GAGCCTAATG GTTACGATGG GCTCGACAGT GAGTTTTTAA ATGTCGAGGT TAGCCATAGC
GTCGCATCAT CGGGGTCATT GGAGGTGTAC TACACTCGCA ACGATGATGG CACGGTCGAA
CATAATCAAG TAGATGATTC AGCAGAAAAA TATGTCACGA CCTTAAACGA GTTTGGGATC
CGTGAAGCTG AATGGTATCT CTGTGCTAAG GAAACCTTAA AGCCTTGTTT GATGGAGCCC
TATCTCTATG AAATCACCCC AGGTAATAAT GCGCTGATGA CCTCTTTAAC CGTGCCAGTG
GTCAAGCATA AGCAGTTTAT TGGGGTGGTG GGCGTCGATG TGAACTTGCC CGTATTTCAG
GCCCTAATCG ATAAATTGTC TAAGAGTCTT TACGACGGTC AAGCCAAGGT AACCTTACTC
AGTACCCGTG GGTTAGTGGT TGCCGCGAGT CATTACAGCA AAAAAGCGCG CCCTCTGAGC
GAATCTATCG ACCCTAAACT TGCCTCGCAG ATAGTCGCGT TACATAAAAA TGGCGGCTAT
ATGGCAAACG ATGATGAGAT TATCGTGGCC TACCCGATAA AAATCCCACT GGCGAAAGCG
GAATGGTCAT TGGCTATCCA AGTCCCTAAG GCTCAAGCCT TTAAGAGCTC CATTGAGTTG
AATGACAAAA TGGATGAAAT GGCCACATCC CTTGGCAGCA TCTTGTTGAT GGTCGGTTTA
GCCGTGTCTA TTCTCGCCGT GGTTACCATC AGCATAGTGA TCCGCAGCAT TATTGCGCCG
CTCAAGATGA TCCAAGGCCG TGTGGAACAC TTGGCCAGTG CCGATGGTGA CTTAACCCAA
TCCATTGTGG TCGATGCCCA TGCGGAACTG ATTGCACTGG GTAAAGGCTT CAACTCCTTT
ATCCATAAGT TGAAAGACTT GATCAGCGAG TTAAAAACGC TTGCGGGACG CACCCAGGAA
GAAAGCTTGT CTTCGGCGCA AATTGCGGAG TTGACCCACG ATAGTGTCCA TCGTCAGTAT
GGCGAAATCG AGAGCGTGGT AACCGCGGTC AATGAGATGA GTGCTACGGC GCTTGAAGTG
GCGAAAGCTT CTGAGCAAAC CGCTGCGGAA ACCGAAGCCA TGTCCCGCAA TGTACGTCTC
AGTGAAGAGA GCCTGACTAA GGCCATGGAA TATGTGACTA CTATGTCGCA GGAGTCGATG
CAGGCGAAAG TGGCTGTGAG CAAAGTGGCT GAAAGTAGCA CGAATATCAG CCGTATTCTC
GAGGTGATCA GCTCTATTGC CGCGCAAACC AACTTGCTGG CTTTGAACGC CGCAATTGAG
GCGGCGCGAG CCGGCGAACA AGGGCGGGGT TTTGCCGTGG TGGCCGATGA GGTGAGGGCG
CTTGCCTCTA AAACCCAAAG TTCGACCGAT GATATCAGTG TGCTGATCGA TGCCCTGCAG
CAAGAAGTAA ATAGTGCCTC AGGCATTATT GATAAAGGTG CTGAGCGCGC ACAAATGGCC
GTGTCGCAAA CCGAGCAAGC ACTCACATCG CTTAATTCTA TGGTCAGTCA GATAGAGGAG
ATTTCTTCTC AGGTGACGCA TATTGCCGCC GCCGCGGAGG AACAAAGCGC GGTAACGGAA
GAAGTGAATC GTAATATCAC TGGGATTTCC GACTCGGCCT CGGAGCTGGC GCGCCTTGCG
GGTGAAGCGC AGCAAAGCAG TGTGGTCCTT GCCGAACTGG TGAAACAGCA GCATCAACAA
TTAGGTAAGC TGAAGACCTA A
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| Protein sequence | MKHLSISTKL LWITSALFLS IVAILSISLW WTLSDQNTEL SNQVQETLQT ETRDKLEARA
GEYGEMVAGF INEAYRIPYS FSGMLESTAE ELPLKRDRLE LAVAAVLKKN NQISSMYAQF
EPNGYDGLDS EFLNVEVSHS VASSGSLEVY YTRNDDGTVE HNQVDDSAEK YVTTLNEFGI
REAEWYLCAK ETLKPCLMEP YLYEITPGNN ALMTSLTVPV VKHKQFIGVV GVDVNLPVFQ
ALIDKLSKSL YDGQAKVTLL STRGLVVAAS HYSKKARPLS ESIDPKLASQ IVALHKNGGY
MANDDEIIVA YPIKIPLAKA EWSLAIQVPK AQAFKSSIEL NDKMDEMATS LGSILLMVGL
AVSILAVVTI SIVIRSIIAP LKMIQGRVEH LASADGDLTQ SIVVDAHAEL IALGKGFNSF
IHKLKDLISE LKTLAGRTQE ESLSSAQIAE LTHDSVHRQY GEIESVVTAV NEMSATALEV
AKASEQTAAE TEAMSRNVRL SEESLTKAME YVTTMSQESM QAKVAVSKVA ESSTNISRIL
EVISSIAAQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LASKTQSSTD DISVLIDALQ
QEVNSASGII DKGAERAQMA VSQTEQALTS LNSMVSQIEE ISSQVTHIAA AAEEQSAVTE
EVNRNITGIS DSASELARLA GEAQQSSVVL AELVKQQHQQ LGKLKT
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