| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2453 |
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| Symbol | |
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| ID | 4076935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2594208 |
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| End bp | 2596574 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638007777 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_614447 |
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| Protein GI | 99082293 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.925334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCT CAAAAAACAT GCGAATTTCT CGCAAGCTGC CGCTGCTGTT TGCAGGCTTT
TGCGCGGGAA CCAGCTTTCT TCTCATTGCC GCTTCCTTGA TCGCCTTCAA CCGCTTTGCA
GAACGATCTG TGCAGGACCA AATGGTGTCC CTTCTGGCCG ATCGAAGCTA TTCGGTGCGG
CAAATCATCT CCAACATCGA GACTGATCTT GTTTCTTTGT CCCAGTCGCC CGCGACGTCC
TCTGCCCTGG TGGCGTTTGA CGAAGGCTGG GAGGCTCTGG GTCCGGATGC ACAAGCCGCC
CTGCAAACGG CCTACATCAC TCAAAACCGC CACCCCAGCG GTGCAAAGCA CAAGCTTGAT
CGCGCGGAGG GAGAGGCCGC CTATCACGAC GCCCATGAGA CCTTTCACAA TGGCCTGCGA
ACGCTGATTG AAGTCAAAGG CTATTATGAC GCCTTCCTGA TCAATCCCGA AGGCGACATT
ATCTATTCGG TCTTCAAGGA GCTGGATTAC GCCACCAACC TCAGCGATGG AAAATATGCA
CAATCCGGCC TTGGTGCTGC CTATCGCGCG GCCACTAAGG CGGCGGAACG CGAGGTCGTC
TTTGCAGATA TGGATCCCTA TGCGCCCAGC GCGGGCGCGG CGGCAGCATT TCTGGCAACC
CCTGTCAAAG GCTCCGATGG CTCCCTCATC GGTGTGATCG CCGTGCAAGT ACCCGTCGAT
ATGCTAGGCG TGATCACCAA CAACAGCGAT GGGCTTGGCA AAACCGCGCA GGTCTTTCTT
GTAGGTGCTG ATTTTAAGGC CCGCACCAAA TCCCGTTTCG ACGGCGGCTT TGGCGTGCTG
GAGACGCTGC CCGAAGTCGA CCACATCAAA GAAGCCCTGC GTGGCGAGAC GGGCTTTTCC
GTTGGAACAA TCGGCCTGGA TGGCCACCCA GTATATGCGG CATCGCGCCC CCTGGGCCTC
GAGCTGGCCA ATTGGGCTCT GGTGGTCGAG CAAGATGTTT CGGATGTGAT GGCTCCTGTG
CGCCAAAAAG CGTGGGCCTT GGTTCTCATC GGGCTCGCGG TCTGCACGAT CATGTCATTG
ATTGGCTGGC GGATCGCAAC CTCGATCACG CGCCCCCTGC ATCAGATCGC AGTGGGGATG
GATCGCGTCG CCTCTGGAGA TGTGGCCACC ACAGTCGAAG AAGCCCAGCG CAGCGATGAA
ATCGGCGACA TCGGGAAATC GCTTCTGTCG CTGCAAGAGG ACCTGAAAGT CGCGCGCGAT
GCAGAAGAGC AGCGCATCGA GCAACAGCGC GAACAGGAGA AGGTTGTCGA AAACCTGAGC
GCGGGGCTTT TGCAGCTTTC TCAAGGTGAC TTCTCCGCCA CGATTGATAC GCCGTTCTCC
GGCGAGCATG AGACGCTGCG CGCGGACTTC AACAAGACCG TCACCACACT GAATGAGACG
CTTGGGCATG TGGTGACTGC GGTGAGCCGC ATCCGAAACG GCGCTGCAGA GATCAATCAA
TCTTCCAACG ACCTGTCCCA TCGCACAGAG AGCCAGGCCG CGACACTTGA AGAAACTGCC
GCTGCATTGG AAGAAATGAC CGCAAGCGTG AAATCTGCGG CGGATAGCGC GCGCAGCGTG
GAAACCATCA CCGGCGAAGC CAAACAGGAG GCAGAAGCCA GTGGCAAAGT GGTGCAAAAC
GCTGTGACCG CGATGACCGA AATCGAAGAA TCCTCAAAAC AGATCGCGCA GATCATTCTG
GTGATCGACG ACATCGCCTT TCAGACAAAC CTGTTGGCGC TGAACGCAGG TGTCGAGGCG
GCGCGTGCAG GTGAAGCCGG TCGCGGGTTT GCCGTGGTCG CAAGCGAAGT GCGCGCATTG
GCGCAGCGGT CTTCGGACGC CGCGATGGAA ATCAAAACGC TGATCGGTGA AAGCTCCAAA
CAAGTGGAAT CGGGCGTTGA TCTGGTGGGT AAAGCCGGCG AAGCCCTCAA CATGATCGTC
GAGCGGGTCA ATAATATCGC GCAGCTGGTC TCCGGCATCG CCGAAGGCGC TTCAGAGCAA
TCCAACGGGA TCGAGGAAAT CAACACTGGC ATGGTGCAGC TGGATCAGGT CACGCAACAA
AACGCCGCGA TGGTCGAAGA GGCTTCAGCA GCTTGCCAGA TGCTTGACAC TGACGCATCC
GAACTGGGTG GCGTTGTGGC CAAGTTCAAA CTCTCCGGTC AAACTGCACA AAACACCCCA
ACCACATCCA CGGCTGTGTC CTCGGCGGCT GCCAGCGACA GTTGGGATCT GGACGCGGAA
ACGGATGAGA CGCCCATGGC GCCTACAGCA CATGGGGTCC CCACCAGCAA CGGCAACGCG
GCCTATAACT TTTACGAGGA CTTCTGA
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| Protein sequence | MFRSKNMRIS RKLPLLFAGF CAGTSFLLIA ASLIAFNRFA ERSVQDQMVS LLADRSYSVR
QIISNIETDL VSLSQSPATS SALVAFDEGW EALGPDAQAA LQTAYITQNR HPSGAKHKLD
RAEGEAAYHD AHETFHNGLR TLIEVKGYYD AFLINPEGDI IYSVFKELDY ATNLSDGKYA
QSGLGAAYRA ATKAAEREVV FADMDPYAPS AGAAAAFLAT PVKGSDGSLI GVIAVQVPVD
MLGVITNNSD GLGKTAQVFL VGADFKARTK SRFDGGFGVL ETLPEVDHIK EALRGETGFS
VGTIGLDGHP VYAASRPLGL ELANWALVVE QDVSDVMAPV RQKAWALVLI GLAVCTIMSL
IGWRIATSIT RPLHQIAVGM DRVASGDVAT TVEEAQRSDE IGDIGKSLLS LQEDLKVARD
AEEQRIEQQR EQEKVVENLS AGLLQLSQGD FSATIDTPFS GEHETLRADF NKTVTTLNET
LGHVVTAVSR IRNGAAEINQ SSNDLSHRTE SQAATLEETA AALEEMTASV KSAADSARSV
ETITGEAKQE AEASGKVVQN AVTAMTEIEE SSKQIAQIIL VIDDIAFQTN LLALNAGVEA
ARAGEAGRGF AVVASEVRAL AQRSSDAAME IKTLIGESSK QVESGVDLVG KAGEALNMIV
ERVNNIAQLV SGIAEGASEQ SNGIEEINTG MVQLDQVTQQ NAAMVEEASA ACQMLDTDAS
ELGGVVAKFK LSGQTAQNTP TTSTAVSSAA ASDSWDLDAE TDETPMAPTA HGVPTSNGNA
AYNFYEDF
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