Gene Pecwa_0006 details

Gene Information

• Locus tag: Pecwa_0006
• ID: 8528356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 7658
• End bp: 9661
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 54%
• Product: methyl-accepting chemotaxis sensory transducer with Cache sensor
• Protein accession: YP_003257482
• Protein GI: 261819376

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACAA CACGGTTACC GGTTCACCAC AGCAATCTAC CCATTCATTC TTCACCAACC 
GCGCCAAAAA AAAAGCTCAG TACACGTACA TTGATGTTAC TCGCTGGCGT CACCACTATC 
GCACTCGGTT TTATTCTCAC TATCGGTCTG TTGATCTGGC AATCCGGCCA GCAGCAAAAA 
ACCATCGCCC AGCAGTATCT TGAACAAACC GCGTATACCA ACAGCTATCT TATTCAGCAA 
AAGCTGGATG TCGCACTCCA TGCAGCACGT AATCTGGTGC AGAGCGTTGT CAGCCTGCAA 
GAAGCAGGTA ACGCCGATCG GAAAACTGCA GAGATGCTGC TGAAAAATGC GTTGAAGAGT 
CACCCCGATT TCCTTTCCAT GTCGCTGGCA TGGGAGCCTG ATGCGTTTGA CGGCAAAGAT 
CGGGAATACG CGAGCCAACC CGACCAAGAC CCGCAAGGCC GCTTCGTCCG CTATGTTGAC 
CGCGATACCG CTGGCAATGT TGCGCTGCAT AATTTGGTGG ATTATGAAAC ACCCGGCAGC 
GGCGATTACT ACCTACTGCC GAAGAAACGC CAAAAAGAAG TAATTCTGGA ACCGTATAGC 
TACCCTTACA ACGGTGTCGA TGTACTGCTG ACTTCCATTG CCGTGCCCAT CATCATCAAC 
AATAAGTTCT ATGGTTCCGT CACTGCGGAT TTTTCACTGG ATACGCTGCA ACAGCTCACC 
AACCGCATCA AGCCCTATCA GGGCACGGGC TACGCGCAGT TACTGTCCCA TACTGGTGCC 
TATATTTCTC ATCCCGACAA AGCGCGGGTA ACTAAAAAAA TTGAAAACGA CGCGACGCTG 
CTTGAGCATG TCACCATCGG TCAGCCTTAT CAGATCGAAC GTGACAACGC CGTGCTGAAC 
ACGCCCGCGT TTACCGTGTA TGTGCCAGTC AATATTGGCA ATACCGGTAC GCCCTGGATG 
CTCGGCCTGT CCGCCCCCGT CAACGTGGTG ATGGCGGAAA CCGCACAGCA GCGCAACATG 
GCGCTACTGC TTATGGTACT GAGTATCGTG GTGGTTTCCG GTGTGTTGGG CATCATCTTT 
AACCGCAAAG TCGCCCGCCC TATCGGTGGC GAGCCTGCTC AGGCAGCCCA AATCGCGCTG 
TCCGTCGCGC AGGGAAATTT AACGCAGATC ATCCCTGTAC AGCCGAGGGA CGACAGCAGT 
ATTTTCTACG CCATGAACGC CATGCAGACG CAGTTGAGAG ATATCGCCGA GCAGTTGATT 
AACACCAGCG AATCCGTCAG CCACGGTGCG ACAGAGATTG CGGCAGGCAA TATCGATCTA 
GCGTCTCGTA CCGAGCAACA GGCTGCGGCG CTGGAAGAAA CCGCCGCCAG CATGGAACAG 
ATTACGGCAA CGGTGAAACA GAACGCGGAT AACGCCCATA ACGCGACAAC ACTGGCGCAG 
AATGCCGCGC ACATCGCTCA GAAAGGCGAC AAGATAGTTG GTCAGGTTGT CCACATCATG 
AGTGAGATCG ACGACAGTTC GAAGAAGATT GCCGACATTA CCAGCATCAT CAGCAGCATC 
GCGTTCCAGA CCAATATTCT GGCACTCAAC GCAGCGGTAG AAGCCGCCAG AGCGGGCGAA 
CAAGGGCGCG GCTTTGCGGT TGTTGCCAAC GAGGTGCGTA ATCTCGCACA GCGTAGCGCC 
AGTGCCGTAA AAGATATCAC CGCGCTGATT ACAGAGTCCG CCAGCCGTGT CGACAACGGC 
GTCACGCTGG TTCAGAGTGC AGGCTCAACC ATGCAGGACA TGCTGCATGC CGTCACCTCG 
GTAAAAGACA TCATGGATGA GATCGTCTCC GCATCGGATG AACAATCGCG CGGTATCAGT 
CAGGTCACGC AGGCGGTTCA CGAGATGGAC GGCGTTACCC AACAAAACGC CGCGCTGGTG 
CAAGAAGCGA CTGCCGCTGC CGCGTCGCTG GAAGAGCAGG CCAGACAGCT CGCGCAGACG 
GTACTGGTAT TCAAGCTGTC TTGA 

 

Protein sequence

MSTTRLPVHH SNLPIHSSPT APKKKLSTRT LMLLAGVTTI ALGFILTIGL LIWQSGQQQK 
TIAQQYLEQT AYTNSYLIQQ KLDVALHAAR NLVQSVVSLQ EAGNADRKTA EMLLKNALKS 
HPDFLSMSLA WEPDAFDGKD REYASQPDQD PQGRFVRYVD RDTAGNVALH NLVDYETPGS 
GDYYLLPKKR QKEVILEPYS YPYNGVDVLL TSIAVPIIIN NKFYGSVTAD FSLDTLQQLT 
NRIKPYQGTG YAQLLSHTGA YISHPDKARV TKKIENDATL LEHVTIGQPY QIERDNAVLN 
TPAFTVYVPV NIGNTGTPWM LGLSAPVNVV MAETAQQRNM ALLLMVLSIV VVSGVLGIIF 
NRKVARPIGG EPAQAAQIAL SVAQGNLTQI IPVQPRDDSS IFYAMNAMQT QLRDIAEQLI 
NTSESVSHGA TEIAAGNIDL ASRTEQQAAA LEETAASMEQ ITATVKQNAD NAHNATTLAQ 
NAAHIAQKGD KIVGQVVHIM SEIDDSSKKI ADITSIISSI AFQTNILALN AAVEAARAGE 
QGRGFAVVAN EVRNLAQRSA SAVKDITALI TESASRVDNG VTLVQSAGST MQDMLHAVTS 
VKDIMDEIVS ASDEQSRGIS QVTQAVHEMD GVTQQNAALV QEATAAAASL EEQARQLAQT 
VLVFKLS