| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2313 |
|---|
| Symbol | |
|---|
| ID | 7310989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2694910 |
|---|
| End bp | 2696613 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643609241 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002506629 |
|---|
| Protein GI | 220929720 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGT TTAATAACTT GAAAATAGGC ACAAAGCTTT TAGCAACCTT TATAATTGTG
GCACTATTAG CAGGAGTAGT TGGAATAGTA GGTATAATTA ATATCAAAAA GGAAGAAAAA
AACTATACCG AGCTTTATAA AAACTTTGGT ATAGCTACCG CTAATATAGG AAAGATAAGT
ACAGACTTTA ACAGCATCAG GGCAATGACC AGAGATATAT TGCTTAGTAA TAGTGTTGAA
GATAAGAAAA ACTATAGCAA CCAGATTAAG GATCTGGACA AAGATGTTCA ATTAAACCTT
AAAGAGCTGT TTGACTCATT GCAAACTGAG AAAGAACAAA AAGCATATAC GGCACTAAAT
GAAGATCTAA ACAAGTACGA TGAAATCAGG GACAGGGTAA TAAATATGGC AATTGCAGGA
CAGGATGATG AAGCCCTGAC ACTATTTTAT AAAGAAGGGA CAGAACCTGC AAAATTAGCA
AAACAGTACA TAGATGAATT ATTCGAATTA AAGGAAACCG GTGGAGTGGA GAGAACTGAA
GAATACTCTA GGGAAACTGA CGCTACTGTT TATACGATGC TTACGGTTGT AGTGATAGCA
GTGATTGTAG CCGTACTTCT GGGAATCTTT ATTTCCAGAT TAATAAGTGT TCCCGTAAAT
AGGCTTGTTA TTGCTGCCGA AAAAATTGCA GACGGTGATT TGAATGTTGA TGTGAAGCAA
AATTCAAAAG ATGAGATAGG AATGCTTGCT TCAGCCTTTA AAAGAATGTC TGACAATCTG
AACGATGTCA TATCAAGCAT CAACTCTGCT GCGGAACAGG TATCCTCAGG CTCCAGGCAG
GTATCTGATT CAAGTGTGGC ACTTTCACAG GGTGCAACTG AACAGGCCAG CTCCATAGAA
GAATTAACTG CCTCCCTTGA AGAAATATCA GCCCAAACAA AATTAAATGC GGAAAATGCA
ACACAAGCCA GCAATCTTGC GGAAAATGTA AAAACAATAG CTTTAAAGGG TAACCAGCAT
ATGAAGGAAA TGCTCAATGC AATGGATGAC ATTAACGATT CATCAAGCAA TATTTCAAAG
ATAATCAAGG TAATAGACGA GATTGCATTT CAGACAAACA TACTTGCCCT TAATGCAGCT
GTAGAAGCGG CAAGAGCCGG ACAACACGGA AAAGGTTTTG CTGTAGTTGC AGAGGAGGTC
AGAAATCTGG CTGCACGTTC GGCAAATGCG GCAAAAGAAA CAACCGATAT GATTGAGGGT
TCAATACATA AGGTAGAAGG CGGAACAAAG ATAGCCAATG AGACGGCAGA AGATCTCGAA
CTAATTGTGG ATGGGATTGC CAAGGCTGCC GATCTTGTAG GTAATATTGC GGAAGCATCT
AATGAGCAGG CTGCGGGAAT TGAACAAATA AACCAGGGCA TTATGCAGGT TTCTCAGGTA
ATCCAGGCTA ACTCTGCAAC CTCAGAGGAA AGTGCTGCTG CCAGTGAGGA ACTTTCCAGT
CAGGCAGAGC TTTTGAGTGA ACAGGTAGAA AGGTTCATAC TTAAGAAAGT TGTACGTTCA
ACAGACAATT ACAGAGGAGA TGGTGAAATA AACCCGGAAA TACTGAAAGT TCTTAACAAA
ATGAGTGATA AAAACAAAAA TATTACACAG AATATAAGGC CTAAAACAAT TGATTTAAGC
GACAATGAAT TCGGTAAATA TTAA
|
|---|
| Protein sequence | MKWFNNLKIG TKLLATFIIV ALLAGVVGIV GIINIKKEEK NYTELYKNFG IATANIGKIS
TDFNSIRAMT RDILLSNSVE DKKNYSNQIK DLDKDVQLNL KELFDSLQTE KEQKAYTALN
EDLNKYDEIR DRVINMAIAG QDDEALTLFY KEGTEPAKLA KQYIDELFEL KETGGVERTE
EYSRETDATV YTMLTVVVIA VIVAVLLGIF ISRLISVPVN RLVIAAEKIA DGDLNVDVKQ
NSKDEIGMLA SAFKRMSDNL NDVISSINSA AEQVSSGSRQ VSDSSVALSQ GATEQASSIE
ELTASLEEIS AQTKLNAENA TQASNLAENV KTIALKGNQH MKEMLNAMDD INDSSSNISK
IIKVIDEIAF QTNILALNAA VEAARAGQHG KGFAVVAEEV RNLAARSANA AKETTDMIEG
SIHKVEGGTK IANETAEDLE LIVDGIAKAA DLVGNIAEAS NEQAAGIEQI NQGIMQVSQV
IQANSATSEE SAAASEELSS QAELLSEQVE RFILKKVVRS TDNYRGDGEI NPEILKVLNK
MSDKNKNITQ NIRPKTIDLS DNEFGKY
|
|---|
| |