| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3161 |
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| Symbol | |
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| ID | 3972597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3504946 |
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| End bp | 3507141 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637926271 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_533022 |
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| Protein GI | 90424652 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.072786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCGT CCTTCTCTTT CAAGACTATG CGATCAGTCC AGCTGAAGAT CGCATTGATC
TCGGGCGCCT GCCTGGTGGG AACGAGCGTC GCCCTGATCG GCTACAGCGT ATTCTCCGCC
CGCAGCACCA TGCAATACGT CGAAACCGAG GTGTCGCAGC TGGTCGATCG GCAGACCAAG
GAGAACCTGC TCAGCAGGGC CGCCAGCGAG GCCAACGCGA TCAAGGCGGA GCTGGAACTC
GGACTGGACG CGGCGCGCAC CATGGCGCAG TCATTCGCCG TGCTCGCCGG CAAGGCCGCC
GCGACGCCCA CCGAGGCGCG CCGCGCCCAA TTGAACGCCG TGCTGCGCAA CGTCGTCGAT
CTCAATCCCT CCTTCAACGG CACCTACTCG GCCTGGGAGC CGGACGGCCT CGACGGCAAC
GACGCCGCAT TCAAGGGCCG CAAGGAGCTC GGCTCCGACG GCACCGGCCG CTTTCTGCCG
TACTGGACCC GCGACTCCAA AGGCTCGATC GCGGTGCAGC CGCTGGTCGA ATACGACAGC
GCCGAACGGC ACCCCAATGG CCTGGTGAAG GGCGCCTGGT ACATCAACCC GCTTACCACT
GGCAAAGAGA ATATTCTCGG GCCGCTGCCC TATATCGTTC AGGGCCAGCA GGTGTTCCTC
GCCACCATGT CGGTCCCGGT GATGATCGAC GGCAAATTCC ACGGCGTCGC CGGAGCTGAC
TACAATCTGG ATTTCGTGCA AAAACTGGCC CTGCAGATCA ATGGATCGAT CTTCGAAGGC
AAGGGCAAGG TCACCATCAT CAACGATACC GGCCTCACCG TCGCCAACAG CGCCGGCGCG
GAATTCATCG GCAAGAGCGC AAGCACATCG GATGCGCGTT GGAATGACGG CATCGCCAGC
ATCCGCGCCG GCAAGGCGCT GGTGCAGGAC GATCCGCAAT CAGCCAATAT CGATATCTAT
TCGCCGATCA AGGTCGGCAA CACTGGCTCC GCCTGGGCCG TGGTGATCTC GATCCCGCGC
GCCGTGGTGC TGGCCGGCGT GCGCCAGCTC GACGACTCGC TGGCGTCACG TGCGGCGGCC
ACCACCTACT GGCAGCTCGG CGTTGGTTTG GTCATCATCG CGATCGCGAT CTTCCTGATC
TCGTTGGCCT CCTCCAGCAT CGCGCGTCCC ACCAAGCGCT GCGCCGAATT CGCCCATGGC
ATCTCGAAGG GCGACTTCGA GCAGAAGCTG GATATCGAGC AGGCCGACGA GGTCGGCGTC
CTCGCGGCTG CCCTGCGCGG CATGCAGGAC GACCTCAAGC GCAGAATCGC GCAGCGGATC
GAGGATCAGG CCGCCGCCGA TACGCAGCGA CGCGAAACCA TGCACAGACT GGCCAATGCC
TTCGAAGCCT CGGTCGGCGA GATCGTCGAA ACCGTGTCGT CCTCGTCGAC CCAGCTGGAA
GCCTCCGCCA ACACCCTGAC TGCCACCGCG GAGCGCTCAC AGGAACTGGC CACCACCGTC
GCCGCCGCCT CCGAAGAAGC CTCGACCAAC GTGCAATCGG TGGCGTCCGC CACCGAGCAG
ATGGCGTCCT CGGTCAACGA GATCAGCCGC CAGGTGCAGG AATCCGCGCG GATCGCCGGC
GAGGCGGTCG ACCAGGCCAA GAACACCAAC GACCGGGTCG GCGAACTGTC GCAGGCGGCC
AGCCGGATCG GCGACGTGGT CGAACTGATC AACACCATCG CCGGGCAGAC CAATCTGTTG
GCGCTGAACG CCACCATCGA AGCGGCGCGG GCCGGCGAGG CCGGGCGTGG TTTTGCGGTG
GTCGCCTCGG AGGTGAAGGC GCTCGCCGAG CAGACCGCCA AGGCGACCGG CGAGATCAGC
CAGCAGATCA GCGGCATTCA GACCGCGACG CAGGGCTCGG TGGCGGCGAT CAAGCAGATC
GGCACCACGA TCGGCCGAAT GTCGGAAATC GCCTCGACCA TCGCCGCGGC GGTGGAGCAG
CAGGGCGCCG CCACGCAGGA AATCTCCCGC AACGTGCAGC AAGCGGCGCA AGGCACCATG
CAGGTGTCGT CGAACATCAC CGACGTCGAG CGCGGCGCCT CGGAGACCGG ATCGGCGTCT
TCGCAGGTGC TGTCCGCGGC GCAGTCGCTG TCGCGCGACA GCAACCGGCT GAAGTTGGAA
GTCAGCAAGT TTTTGGACTC GGTGCGGGCG GCGTAA
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| Protein sequence | MMASFSFKTM RSVQLKIALI SGACLVGTSV ALIGYSVFSA RSTMQYVETE VSQLVDRQTK
ENLLSRAASE ANAIKAELEL GLDAARTMAQ SFAVLAGKAA ATPTEARRAQ LNAVLRNVVD
LNPSFNGTYS AWEPDGLDGN DAAFKGRKEL GSDGTGRFLP YWTRDSKGSI AVQPLVEYDS
AERHPNGLVK GAWYINPLTT GKENILGPLP YIVQGQQVFL ATMSVPVMID GKFHGVAGAD
YNLDFVQKLA LQINGSIFEG KGKVTIINDT GLTVANSAGA EFIGKSASTS DARWNDGIAS
IRAGKALVQD DPQSANIDIY SPIKVGNTGS AWAVVISIPR AVVLAGVRQL DDSLASRAAA
TTYWQLGVGL VIIAIAIFLI SLASSSIARP TKRCAEFAHG ISKGDFEQKL DIEQADEVGV
LAAALRGMQD DLKRRIAQRI EDQAAADTQR RETMHRLANA FEASVGEIVE TVSSSSTQLE
ASANTLTATA ERSQELATTV AAASEEASTN VQSVASATEQ MASSVNEISR QVQESARIAG
EAVDQAKNTN DRVGELSQAA SRIGDVVELI NTIAGQTNLL ALNATIEAAR AGEAGRGFAV
VASEVKALAE QTAKATGEIS QQISGIQTAT QGSVAAIKQI GTTIGRMSEI ASTIAAAVEQ
QGAATQEISR NVQQAAQGTM QVSSNITDVE RGASETGSAS SQVLSAAQSL SRDSNRLKLE
VSKFLDSVRA A
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