Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0984 |
Symbol | |
ID | 4078146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1052015 |
End bp | 1053841 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006288 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_612979 |
Protein GI | 99080825 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0666136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.983928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTAG CATCTTGGTT CCGGAACATG CCCGTGAAGC GTAAGATCCT GCTTCCTGGG ATGGCTGGAT TGCTCATGAT GATCTGCGTG ATCACGACTT ACTGGACTCA GCGCCTGTCG ACGGCGCTCT ATAGCGGCTT TGAAGAGCAG GTCGCGCTGA CTGAGTCCTA CATCGCGGCG CCCCTCGCGA CGGCCGCATG GAACTATGAT GGCGACTTGG CCAATACGAC ACTGGCTTCG CTTGCCGAGC GCGAGTCCTT TGTGTTTGCG CGTGTGGTCA GCAGCGGCGA TGTGCTTGCC GAAGCCTTCA AGGGAGAGGC GATGGAAGAG GCGTGGATCG CGCAATCTAC CAGTCTGCTT GAATCCGATC AGGTGCGGCT GGAGGATGGC GATTTCACCT ACTTCAAGAC GCCCTTGATG TTCGAAGGTG AAGAAGCCGG CAATATGGTC TGGGCGCTCG ACACCTCGAT CATTGCCAAC CAGATCATGA ATGCCAACAT TATCGCGGCC AGCCTTGGTT TTGCGATTTT CGCAGGCTTT TCGGTCGTCT TCTACCTCAT CGCAGTTGCG GTATCGCGCC CGATCGAGAA TGTGGTGACG CATATTGACG CGCTGCAGCA CGGTGACACG ACGCGTGAAA TCCCCGAGGC GAACCGCCGT GATGAAATTG GCGCATTGGG CAAGGCGCTG GTCGATTTCC GCGACACATC CGCCGAGCAG AAGCGCATGG AAGAAGAAAA ACGCAAGCAG GACGCGGTGC AGGAACATGT CGTGACCGTT CTCTCCGAGG CGCTTGGCAA GCTGTCCACC GGCGACCTCA CGGTGAGCAT CAAGGACGAT TTCCCGGCGG ATTACGAGAA GCTCAGCAAG GATTTCAACG CTCTGGTCAA TCGCCTGTTC GATACGGTTT CGGCTGTGGT CGATGCGGCG GACAGCATCC AGAACGGTTC CACCGAGATC AGCTCGGCCT CTGACGATCT TGCGCGCCGC ACCGAGAGCC AGGCGGCCAC CCTTGAAGAA ACCGCTGCTG CACTGGATGA GCTGACTGCA TCGGTGCGTC AGGCCGCCGA AGGGGCTGGA AGCGTGTCCA ACACCATGGA AGAGGCAAAA GCCGAAGCCG TGAACAGCGG CACCATCGTC AACAATGCCG TTTCGGCCAT GACCGAGATC GAGCAATCCT CGAATCACAT CTCTCAGATC ATCGGCGTGA TTGATGACAT TGCCTTCCAG ACCAACCTTC TGGCGCTGAA CGCGGGTGTC GAAGCCGCGC GTGCAGGTGA AGCAGGGCGC GGGTTTGCCG TGGTGGCCTC CGAGGTGCGC GCCTTGGCGC AACGCTCCTC CGATGCAGCC ATGGAGATCA AGACCCTCAT CGGCGACAGC TCCAAACAGG TGGAACGTGG TGTGGATCTC GTCGGCAAGG CAGGCGATGC GCTTCACAAC ATCGTTGAGC GTGTCACCCA GATCTCCGGC CTGATCTCTG ACATTGCACA AGGCGCGAGC GAGCAATCCG CAGGTCTTGG CGATATCAAC AGCGGCATGG TGGAACTGGA TCAGGTGACC CAGCAGAACG CCGCCATGGT GGAAGAGGCG ACTGCCGCGA GCCATATGCT CAAGGCCAAT GCGGTCAACC TCGCGCAGAT GGTTGCTCAT TTCCAGCTCG GCGCCGGTGG GCGCGCGGCT TCTGCTGCTC CAGCCCCTGC TGCAAAGGAT GCCGAGACGA TCGCGCCGTC GGCCCATGGC GAGGATTGGG ACTATACGCC CGAACCAAGT CAGGTGGCCG TCGCCAGCAG CGGCAACGCG GCGGCGAAGA TCTGGGAAGA CTTCTGA
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Protein sequence | MFLASWFRNM PVKRKILLPG MAGLLMMICV ITTYWTQRLS TALYSGFEEQ VALTESYIAA PLATAAWNYD GDLANTTLAS LAERESFVFA RVVSSGDVLA EAFKGEAMEE AWIAQSTSLL ESDQVRLEDG DFTYFKTPLM FEGEEAGNMV WALDTSIIAN QIMNANIIAA SLGFAIFAGF SVVFYLIAVA VSRPIENVVT HIDALQHGDT TREIPEANRR DEIGALGKAL VDFRDTSAEQ KRMEEEKRKQ DAVQEHVVTV LSEALGKLST GDLTVSIKDD FPADYEKLSK DFNALVNRLF DTVSAVVDAA DSIQNGSTEI SSASDDLARR TESQAATLEE TAAALDELTA SVRQAAEGAG SVSNTMEEAK AEAVNSGTIV NNAVSAMTEI EQSSNHISQI IGVIDDIAFQ TNLLALNAGV EAARAGEAGR GFAVVASEVR ALAQRSSDAA MEIKTLIGDS SKQVERGVDL VGKAGDALHN IVERVTQISG LISDIAQGAS EQSAGLGDIN SGMVELDQVT QQNAAMVEEA TAASHMLKAN AVNLAQMVAH FQLGAGGRAA SAAPAPAAKD AETIAPSAHG EDWDYTPEPS QVAVASSGNA AAKIWEDF
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