Gene Dd703_3926 details

Gene Information

• Locus tag: Dd703_3926
• ID: 8087311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 4548455
• End bp: 4550452
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644838017
• Product: methyl-accepting chemotaxis sensory transducer with Cache sensor
• Protein accession: YP_002989501
• Protein GI: 242241320
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAATG CCTTGACCCA CTACTCTGCC GGCGCAACCG CGTCGATATC TGCCGCCAAC 
AGGAAAAAGC TCTCGACCCG AGCGCTGGTG CTGATTACCA CAATATTCAC CATCGTGTGC 
GGTTTCGCCG TGGTGCTTGG TTTTCTCATT TGGCAGAGCA GCCAGCAGCA AAAAGCCAGC 
GTCCAACAAC TGCTGGAACA GATGTCAAAA ACCAATGCAT ATGCGGTACA GGGCCAGATT 
GACGTCGCCT TGTTCACTGC TCGCAACCTG GTTCAAAGTG TGACGACTTT ACGCAGTGAA 
GGATCGCCAG ACCGCGCTAC CGCCGAAAAT TTGCTGAAAA ATGCGCTCAA AAACAATCCA 
TCGCTGCTGT CGATGTCACT CGCGTGGGAA CCCGATGCAT TTGATGGTAA AGACCAGCAA 
TACGCCGCAC AGCCGGATCA AGACCCCAAA GGTCGGTTCG TTAAATATGT CGACCGCGAC 
AACGCAGGAA ACATCGCGAT CCACAATCTG ACCGATTACG AAACCCCAGG CAGCGGCGAT 
TACTATCTGT TGCCGCGCAA GCTGCAAAAA GAAGTGGTGC TTGAGCCATA CAGCTATCCT 
TACAACGGCG TTAACGTGCT GCTGACCTCT ATCGCGGTGC CGATCATGAT TAACGGCAAA 
TTCTACGGTT CCGCCACCGC CGATTTCTCG CTGGAAACGC TGCAACAGAT GGTCGGCAAC 
TTCAAACCGT TTAACGGTAC GGGCTACGCC ACCCTGTTCT CCCCTTCCGG CGCCTATTTG 
TCCCACCCGG ACAAAACCCG GATCACCAAA AAACTGGAAG GCAATCAGCC GCTGATGGAG 
AGCATTACGT CGGGCAAAGC CTATAACAGC GAGCACTTCA ACTCGTTCAC CAACACCTGG 
ATGATGAACG CTTACAGCCC GGTCAATATC GGCAATACCG GAACGCCCTG GATGTTAGGA 
ATTACCGTAC CGGTGGATGT CGTGATGGCG AACGCCATCA AACAGCGCAA TATTGCGTTG 
ATCATGGCAG TGCTGAGCAT TGTGGCGGTA TCGCTGGTCA TTTCCCTCGT TTTTACCCGC 
AAAGTGCTGC GCCCAGTGGG GGGAGAGCCA GTGCTGGCGG CGGAAATCGC GCTAAGAGTA 
TCCCAAGGCG ATCTGACCCA CGCCATCCCG GTACAACCCG GCGATACACG CAGCATTTTC 
TATGCTATGG CGGTAATGCA GCAGCAGTTG CAGGAGATTG CCGGGCAGTT GCTTAACTCC 
AGCGAATCGG TCAGCCACGG CGCGGCGGAG ATTTCCGCCG GTAACGTCGA TCTCGCCGCC 
CGGACGGAGC AGCAGGCGGC CGCGCTGGAA GAGACCGCCG CCAGCATGGA ACAAATTACT 
GCCACGGTAA AACAAAATGC CGACAACGCG CACAACGCCA CCCGTCTGAC CCATAATGCA 
GAGCAAATTG CCCAGCGCGG CGATGAAATC GTCTCTCAGG TGGTCAACAT CATGGGCGGC 
ATCAACGAAA GCTCGCGGAA AATCAGTGAA ATCACCGGTA TCATCAGCAG TATCGCGTTC 
CAAACCAATA TTCTGGCGCT GAACGCTGCC GTAGAAGCCG CCCGCGCCGG CGAACAGGGA 
CGCGGTTTTG CGGTAGTCGC CGGCGAAGTC CGCAATCTGG CGCAGCGCAG CGCCGATGCG 
GTGAAAGACA TCACCACGCT GATCAGCGAA TCGGCATCGC GCGTCGAGCA AGGCGTCGGC 
CTGGTGGAAA ATGCTGGCGT CACTATGCGC GACATGCTCG CGGCAGTGAC ATCGGTTAAA 
GACATTATGG AAGAGATCGT CGCGGCGTCC GACGAACAAT CCCGCGGCAT CAGCCAGGTT 
ACGCAAGCGG TTCACGAAAT GGACGGCGTG ACCCAGCAGA ACGCCGCGCT CGTACAGGAA 
GCCACTGCCG CCGCCGCCTC GCTGGAAGAT CAGGCCGGGC AGTTGACCCG GTTAGTGCAG 
GTTTTCCGGC TATCATGA 

 

Protein sequence

MSNALTHYSA GATASISAAN RKKLSTRALV LITTIFTIVC GFAVVLGFLI WQSSQQQKAS 
VQQLLEQMSK TNAYAVQGQI DVALFTARNL VQSVTTLRSE GSPDRATAEN LLKNALKNNP 
SLLSMSLAWE PDAFDGKDQQ YAAQPDQDPK GRFVKYVDRD NAGNIAIHNL TDYETPGSGD 
YYLLPRKLQK EVVLEPYSYP YNGVNVLLTS IAVPIMINGK FYGSATADFS LETLQQMVGN 
FKPFNGTGYA TLFSPSGAYL SHPDKTRITK KLEGNQPLME SITSGKAYNS EHFNSFTNTW 
MMNAYSPVNI GNTGTPWMLG ITVPVDVVMA NAIKQRNIAL IMAVLSIVAV SLVISLVFTR 
KVLRPVGGEP VLAAEIALRV SQGDLTHAIP VQPGDTRSIF YAMAVMQQQL QEIAGQLLNS 
SESVSHGAAE ISAGNVDLAA RTEQQAAALE ETAASMEQIT ATVKQNADNA HNATRLTHNA 
EQIAQRGDEI VSQVVNIMGG INESSRKISE ITGIISSIAF QTNILALNAA VEAARAGEQG 
RGFAVVAGEV RNLAQRSADA VKDITTLISE SASRVEQGVG LVENAGVTMR DMLAAVTSVK 
DIMEEIVAAS DEQSRGISQV TQAVHEMDGV TQQNAALVQE ATAAAASLED QAGQLTRLVQ 
VFRLS