| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4113 |
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| Symbol | |
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| ID | 7388907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3467486 |
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| End bp | 3469822 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652815 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002550988 |
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| Protein GI | 222150031 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.433818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTA AGTCCATACA AATGAAAATT GCCGTGCTTG CAGGTCTTTG CGTCCTGTCT
GCCACGGCTG GCCTGGTCGG CTATGGCATT GTCTCCGCCG GGCAGACAAG AGATTTTGTC
GGCGATAACG TCACCAAGCT CACCGAAGCC AAAACCCGGG AAGCCCTGTC CACGCTCGCC
TCCACCCAGT CGGGCATCAT CCGGTCATCG CTGGATGGCG CTTTCGATGC CGCACGGAAT
CTGGCACGTA GTTTTGAGGT TGCTGCGGGC GACAAGGTCA ATGGTACGGC GGTGGAGCTG
AGGCGCGGGC AGCTTAACGC CATGTTGCTG AACCTGCTCA AGGATAATCC GCGTTTCAAC
GGCACCTATA GTGCCTGGGA GCCGAATGCG CTTGATGGCA ATGACAGTCA GTTCCGCGAC
CGCCGCGATC TGGGGTCCGA TGCGACGGGG CGCTTCCTGC CCTATTGGAC CCGGGATGCG
GCGGGCAAGA TCGCCATTCA ACCGCTTGTC GAATATGACA GTGCAGAATT GCATCCGAAC
GGAGTGATGA AGGGCGGCTG GTATATCGGT CCGCAGCAGG GCGGGGGCGA GAGCATTCTC
GATCCATTGC CTTATATCGT TCAGGGCAAG AACGTGTTTC TTGCCACCAT GTCTGTGCCA
ATCATGATTG ATGGCAAGTT TCGCGGTGTC GCCGGGGCCG ATTTCGATCT CGGCTTCGTG
CAGAAGCTGG CAGAGGATGT GCGCGCTTCA ATCTATGGCG GCAAGGCAGG CGTTAAGATC
GTGAGTTACA AGGGGTTGGT GGTCGCCGAT AGCGAGCATC CAGACACAAT CGGGCAGCGT
TTTGACAAGA CGACACCGGC GCTCTCCGGC CTTCTACCGA TGATCCAGGG TGGCAAGGCC
GACGTTCTTG CCGATGCCGA TCAGTTTCAG GCATTTTCCC CAATCGCCAT TGGGCGTACC
AAGACACCAT GGTCGGTGAT CGTGTCCGTG CCCAGGCCGG TGGCGATGGC CGAGGCAATC
AGCCTGGACC AGGCGCTGAA CCAGCGCGGC GGCAGTGATA TCATCTTCCA GGCTATCGTC
GCCCTGATCA TTGCGGCCGG TGGTATCGGT GCCATGTGGT TCGTGGCGCT CAGCATTGCC
AAGCCAATCC GGGCCATGAC GGCCAGCATG GGCCAGCTTG CCGGTGGCGA GACGGATATC
ACCATTCCTG GCGCGGGCAG GGCCGATGAA ATCGGTGCTA TGGCCGATGC GGTCGGCGTG
TTCCGTGACA ATGCAGTCGC GAACCGCCAA CTGGAGCAGG ATGCGGCCGC CAGCCGCCAG
ACAACGGAAA CCGAACGTCG CCGCACCGCA GAAGTCGACA GGTTGCGGGC CGAAGCGATG
GCCCAGGCCA CGTCCGGCCT TGCCGATGGC CTCAAGCATC TTGCCAATGC CGATCTGACG
TTCCGGCTGG ACCAGCCCTT CGCGCCGGAA TTCGAAAGCC TGCGGGCCGA TTTCAACGCG
GCCATCACCC AGTTGCGCGA GGCAATGATC GCCGTGACCC AGGCCTCGCA ATCGATTGAC
AACGGTTCAC TGGAAATCAG CGGCAGTTCC GATGAACTGT CCAAGCGCAC GGAACAGCAG
GCTGCATCGC TGGAAGAGAC GGCCGCAGCC CTGGACCAGA TCACCGCCAA TGTCGGCAAT
TCTTCCAAGC GTGCCGAAGA AGCAAGAACA GTCGCCGTCG AGGCCAATAG CAGTGCGACC
AGCTCGGGCC GTGTTGTGGC GGATGCGGTC AATGCCATGC AGCGCATCGA ACAATCGTCC
AACCAGATCG CCAATATTAT CGGGGTGATC GACGAGATCG CTTTCCAGAC CAATCTTCTG
GCGCTGAACG CTGGCGTGGA AGCGGCGCGC GCGGGCGAGG CTGGCAAGGG TTTTGCCGTC
GTCGCTCAGG AAGTCCGCGA GCTTGCCCAG CGCTCCGCCC AGGCGGCCCG CGAAATCAAG
GAACTGATCC GCAATTCGAC GGTCGAAGTG GATAGAGGCG TGGAACTGGT GCGCAATACC
GGCGAATCAC TAAAGACCAT TGTGGATTAT ATCGTGACGA TCAACCGGCA TATGGATGCC
ATTGCTCTCT CCGCGCGCGA ACAGTCTGTC GGGCTGTCCG AAGTCAACAC CGCCGTCAAC
CAGATGGACC AGGTCACCCA GAAAAATGCC GCCATGGTCG AGGAAACCAA TGCAGCGAGT
GCGGCGCTGG CCTCCGAGGC AACGGTTCTG CTTGATCTGG TTCGGCGGTT TAATCTTCAT
CCCTCCCATG GAGCCACCGG TTCCCAGCAG CCGACCGGCT TGCGGCGGGT GGGGTGA
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| Protein sequence | MQFKSIQMKI AVLAGLCVLS ATAGLVGYGI VSAGQTRDFV GDNVTKLTEA KTREALSTLA
STQSGIIRSS LDGAFDAARN LARSFEVAAG DKVNGTAVEL RRGQLNAMLL NLLKDNPRFN
GTYSAWEPNA LDGNDSQFRD RRDLGSDATG RFLPYWTRDA AGKIAIQPLV EYDSAELHPN
GVMKGGWYIG PQQGGGESIL DPLPYIVQGK NVFLATMSVP IMIDGKFRGV AGADFDLGFV
QKLAEDVRAS IYGGKAGVKI VSYKGLVVAD SEHPDTIGQR FDKTTPALSG LLPMIQGGKA
DVLADADQFQ AFSPIAIGRT KTPWSVIVSV PRPVAMAEAI SLDQALNQRG GSDIIFQAIV
ALIIAAGGIG AMWFVALSIA KPIRAMTASM GQLAGGETDI TIPGAGRADE IGAMADAVGV
FRDNAVANRQ LEQDAAASRQ TTETERRRTA EVDRLRAEAM AQATSGLADG LKHLANADLT
FRLDQPFAPE FESLRADFNA AITQLREAMI AVTQASQSID NGSLEISGSS DELSKRTEQQ
AASLEETAAA LDQITANVGN SSKRAEEART VAVEANSSAT SSGRVVADAV NAMQRIEQSS
NQIANIIGVI DEIAFQTNLL ALNAGVEAAR AGEAGKGFAV VAQEVRELAQ RSAQAAREIK
ELIRNSTVEV DRGVELVRNT GESLKTIVDY IVTINRHMDA IALSAREQSV GLSEVNTAVN
QMDQVTQKNA AMVEETNAAS AALASEATVL LDLVRRFNLH PSHGATGSQQ PTGLRRVG
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