| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3177 |
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| Symbol | |
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| ID | 4075347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 158482 |
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| End bp | 160731 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004680 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_611413 |
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| Protein GI | 99078155 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.726311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC TTCTAAAGAC TGTAGCAGGC AAACTGGTTC TCGCGACCGG CATAGCCATC
ACCGTCATTC TGGCGGGCTA CATCAGCATC AGTGGCTGGC GCGCATCGCA CCAGGCGGAT
CAACAGGTGA TGGAGCTGGC CACACAACAG GCCGGGGAAA TCGCGCAGAC CATCGCCGTT
CAGGTGACGC AGGCAACCTC TGCCGGGGCC GCCGTGAGCG GCGCGCTTTC GGGCTATATG
GCGGGCGGCA ACGCCAACAC CGCGGACGCG ATCGAGCTGC TGCGTGGTGT GCCCACACAG
TATGAGACGA TCTTTTCCTC CTGGATGGCG GGCATGCCCG ATGGGTCGAC CGACGCTTTC
CTGACCGGAG CTGAGGGGCG CAACGAGAGC GGCGTATTCA CCCCCTACTG GACCAAAGCG
GATCAGGGTG GGCTGGATTT CTCGACCTTT GACATCGACC CGACCTCGCA ATGGTTTGCC
GCCCCGATCG AAACATCCGC CAGCATCATC ACAGAGCCAT ATCTCTCCTC CGAAGGGCGT
CTGCTGACCT CTGTATCGGT GCCCGTCGTG GTCGAGGGCC AGACCGTCGG CGTTGCCGGC
GTGGACATTG TCCTGACCGA TCTCACCACG ATGCTCGGCA CGCTTGAAAC CTTTGAGGGC
GGGCGCGTCA TGTTGGTGGA CAGCAACGGC AAATGGCTGG CGAACCCGGA TGTAGCGGAC
CTGACACAGC CCTACGACGA AACCGGTGCA GAGCTGGTGG AAGCCGCGCT TGCCGATGGC
GCACCTCGGG TCATCACCGG GCTCCCGGAT GGCGCGACGC GCCTTGTCTA TCCGTTCACG
GCACCGGGCA TGAACACCAC CTGGGCCACG ATCCTCGATG TGCCGGCCGC GGTGTTCACC
ATCCCCGTGC GCGATGCGGT GCTCTCCTCT GTTTCAGGCG GCGTGTTGAT CCTGCTGATG
TCGCTCGGCA CCATCTACTT TACCGCGCGC GCGCTGGTGG GGCGGCCCCT GAGCGAAATG
CTCTCCTCCG TCAACAAGCT GGCCTCCGGT CAATATGATG AGGCCGTGCA AGGCACGGAG
CGCAAGGATG ATGTCGGCAC AATGGCCGCC TCGGTCGAAG CTCTGCGCGA ACGTCTTCTG
GAAAAAGAAC ATCTCGAACA GGAGCAGGAC AAACAGCAAG CCGAACAGGC GCGCGTTGTC
GACACCCTCG CCCAGAGCCT GCGGTCCCTC GCCAAAGGGG ATCTGTCGCG CACCATCGAC
GAGGAATTCT CGGGCTCTTA CGAGGCGCTG CGCGAAGATT TCAACCTGAC CGTCAACACG
CTCAATGACA TGATGGCCAC CCTCTCCGAG AGCATCATGG AAATTCGCGC GCGGTCTGAT
GAAATCAGCC TTGGCTCTGA TGAACTGGCG CGCCGCACCG AAAGCCAGGC GGCCACGCTC
GAAGAAACCG TCGCCGCGCT CGACGAAATG ACCACCTCGG TCCGCTCGGC TGCGGATACC
GCCGCCAATG TGGAGCGCAA TATTTCCGAG ACGCGCAAGA ATGCAGAAAC CTCTGGCGGC
ATTGTTCGCG ATGCGGTGGT TGCCATGTCC GAGATCGAGA AATCCTCGGA GAAGATCAAC
CATATCATCA ATGTCATCGA GGATATTGCC TTTCAGACCA ATCTGTTGGC CCTGAATGCC
GGGGTCGAGG CGGCGCGCGC CGGCGAGGTG GGACGCGGCT TTGCGGTTGT CGCCTCAGAG
GTCCGCGGGC TTGCGCAGCG CTCTTCTGAG GCCGCGATGG ACATCAAACA GCTGATTGAA
TCCAGCTCCG CGCAGGTCGC AAGCGGGGTG GGATTGGTCA ACCGAGCAGG CGAGTCACTG
ACCGATATCG TCGACCGGGT TGCCCGTGTC GCCGACGAGA TGTCCGAAAT CGCCGCTGGG
GCAAACGAGC AATCTGTTGG CCTTGGAGAG ATCAACACCG GCGCCACGCA GCTTGATCAG
GTGACACAGC ACAACGCCGC GATGGTCGAA GAAACCTCTG CAGCCGCCGT GACACTGCAG
CGCGAGGCCG CCTCACTTGA ACGTCAGGTG GGCCGCTTCA CCCTGCGCGC GCGCAGCTCC
AAGCCGCAGG GTGCCGCAAA GCCCTCGGCT CAGACCATCA AGCGGGCAGA TGCTGTCGCT
GACCACAGCG CCCCGGAGGC AGACATGGCG GATTTTGACA TCCAGCCTGA CGTGCCCAAG
GTGGCCAATG CCGGCTGGAC TGACTTCTAA
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| Protein sequence | MSDLLKTVAG KLVLATGIAI TVILAGYISI SGWRASHQAD QQVMELATQQ AGEIAQTIAV
QVTQATSAGA AVSGALSGYM AGGNANTADA IELLRGVPTQ YETIFSSWMA GMPDGSTDAF
LTGAEGRNES GVFTPYWTKA DQGGLDFSTF DIDPTSQWFA APIETSASII TEPYLSSEGR
LLTSVSVPVV VEGQTVGVAG VDIVLTDLTT MLGTLETFEG GRVMLVDSNG KWLANPDVAD
LTQPYDETGA ELVEAALADG APRVITGLPD GATRLVYPFT APGMNTTWAT ILDVPAAVFT
IPVRDAVLSS VSGGVLILLM SLGTIYFTAR ALVGRPLSEM LSSVNKLASG QYDEAVQGTE
RKDDVGTMAA SVEALRERLL EKEHLEQEQD KQQAEQARVV DTLAQSLRSL AKGDLSRTID
EEFSGSYEAL REDFNLTVNT LNDMMATLSE SIMEIRARSD EISLGSDELA RRTESQAATL
EETVAALDEM TTSVRSAADT AANVERNISE TRKNAETSGG IVRDAVVAMS EIEKSSEKIN
HIINVIEDIA FQTNLLALNA GVEAARAGEV GRGFAVVASE VRGLAQRSSE AAMDIKQLIE
SSSAQVASGV GLVNRAGESL TDIVDRVARV ADEMSEIAAG ANEQSVGLGE INTGATQLDQ
VTQHNAAMVE ETSAAAVTLQ REAASLERQV GRFTLRARSS KPQGAAKPSA QTIKRADAVA
DHSAPEADMA DFDIQPDVPK VANAGWTDF
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