Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2301 |
Symbol | |
ID | 4922294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2695151 |
End bp | 2697268 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640163886 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001094426 |
Protein GI | 127513229 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACT TGTCCATCAG TACTAAGTTG CTTTGGATCA CCTCAGCGCT GTTTTTGATC ATAGTCGCCA TCCTCTCCTT CAGCCTCTGG TGGTCGCTCA GCGATAAAAA CGCGCAACTG GCGGGCCAGG TGCAAGGTGC GCTGCATGAT GAAACTCGCC AGCGCCTCAG TGCCCGGGCC GGTGAGTATG GCGAGCGGGT GGCGGGTTTT ATCAATGAGG CCTATCGGAT CCCCTTTTCG TTTGCCGGCA TGATAGAGCA GAGCGCCGCT AGCCAGCCGC TATCCCGAGA AGGGGTAGAG GAGTCGGTGG CCGGCGTGCT GCGAAAAAAC AGTCAGCTCT CTTCTATGTA TGCCCAGTTT GAGCCCAACG GCTACGATGG CCGCGACGGC GACTATACCC AGAAGATCAG TCACAGCGTA CCCGAGGTGG GTACCCTGGA GATCTATTAC ACCCGCAGCG ACGATGGCAG CGTCGAGCAT CAGCAGGTGG ATGACGCCAG CGAGAAGTAT GATGCCACTC TCAAGGAGTT TGGCGTGCGC GAGGCCGAAT GGTACCTGTG CGCCAAGGAT ACTAAGCAGC CCTGTCTGAT GGAGCCCTAC CTGTATGAGA TAAGCCCGGG CAACACGGCG CTGATGACCT CCTTGACCGT GCCTGTGGTG GTTGGCGGCA GCTTTCGCGG TGTAATCGGC GTGGATGTTA ATTTGCCGGT GTTTCAGAAG CTGATCGACG AGCTCTCCGC TAGCCTGTAT CAGGGCAAGG CCAAGGTGAC CCTGCTGAGC CAGAAGGGCT TGGTGGTGGC GGCCAGTCAC TATGATAAGA AGGCGCGGCC ACTGGGCGAG TCTATCGCCC CGTCGCTCGC CAGTCAGTTG ACCGGGCTGC ATCGCCAGGG CGGTTATCTG GAGCAGGGCG ATAACATCAT AGTTGCCTAT CCTATCGAGA TCCCGCTCGC CAAGGCGCAG TGGTCGCTGG TGATTGAGGT GGCCAAGGCC GATGCCTATC AGGCGGCAAA TGCCATGGAT AAGGCTATGT CGGCGATGGC CAGCTCTCTG GGCAGCCTGC TGCTGATCGT AGGCGTCATC GTTTCGCTGA TCGCCGTGGT TACCATCAGC CTGGTGATCC GCTCTATTGT CGCGCCGCTG AAGGTGATTC AGAGCCGGGT GGAAAACTTA GCCAGTGCCG AAGGAGACCT GACTCAGCAG GTCACAGTGG AGTCCCACGC CGAACTCATC GCCCTGGGCG GTGGCATCAA CGGCTTTATC AATAAGTTGA GGCTGCTAAT TGGCGAGCTT AAGGAGCTGG CATCACGCTC GCAGGCCGAG AGTCAGGTGG CGGCGGAGAT AGCCCAGCAG ACTCACAACA GCGTCAATCG TCAGTACAGC GATATCGAGA GTGTGGTGAC CGCGGTTAAT GAGATGAGCG CCACGGCGCT CGAGGTGGCC AAGGCATCTG AGCAGACGGC CTCGGAAACC GAAGCCATGA CCCTCAACGT CAAGGCAGGT GAGGACAGCC TGAGCCAGGC GATGGGCTAT GTGACCCATA TGTCTCAGGA ATCCCTGCTG GCCAAGGAGG CCGTGGGTAA GGTGGCGGAA AGCAGCACCA ACATCAGCAA GATCCTCGAG GTGATCAGCG CCATCGCCGA GCAGACCAAT CTGCTGGCGC TTAACGCCGC CATCGAGGCC GCCCGCGCCG GTGAACAAGG CCGGGGCTTC GCCGTGGTCG CGGATGAGGT ACGCGCGTTG GCCTCCAAGA CCCAGAGTTC GACCGATGAG ATAGGCAAGT TGATCGAGGC GCTGCAGCGT GAGGTCAACA GCGCCTCGCA GATCATCGAC CAAGGGGTGG ATGGTGCCCA GCGCGCCGTG GCTCAGACAG AGTCGGCCCT GAGTTCACTC AACACCATAG TGAATCAAAT TCAGGAGGTC TCCAGCCAGG TGACCCATAT CGCGACCGCC GCCGAGGAGC AGAGTGCCGT GACCGAAGAG GTCAGCCGTA ATATCACAGG CATCTCAGAT TCCGCCTCCG AGCTGGCGAG ACTCGCCGAC GAGGCCCAGC AGAGCAGTGC CAGCCTGGCG GGCCTGGTGG AGCAGCAACA CCAGCAGTTG GGTAAGTTAA AGACCTAA
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Protein sequence | MKHLSISTKL LWITSALFLI IVAILSFSLW WSLSDKNAQL AGQVQGALHD ETRQRLSARA GEYGERVAGF INEAYRIPFS FAGMIEQSAA SQPLSREGVE ESVAGVLRKN SQLSSMYAQF EPNGYDGRDG DYTQKISHSV PEVGTLEIYY TRSDDGSVEH QQVDDASEKY DATLKEFGVR EAEWYLCAKD TKQPCLMEPY LYEISPGNTA LMTSLTVPVV VGGSFRGVIG VDVNLPVFQK LIDELSASLY QGKAKVTLLS QKGLVVAASH YDKKARPLGE SIAPSLASQL TGLHRQGGYL EQGDNIIVAY PIEIPLAKAQ WSLVIEVAKA DAYQAANAMD KAMSAMASSL GSLLLIVGVI VSLIAVVTIS LVIRSIVAPL KVIQSRVENL ASAEGDLTQQ VTVESHAELI ALGGGINGFI NKLRLLIGEL KELASRSQAE SQVAAEIAQQ THNSVNRQYS DIESVVTAVN EMSATALEVA KASEQTASET EAMTLNVKAG EDSLSQAMGY VTHMSQESLL AKEAVGKVAE SSTNISKILE VISAIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRAL ASKTQSSTDE IGKLIEALQR EVNSASQIID QGVDGAQRAV AQTESALSSL NTIVNQIQEV SSQVTHIATA AEEQSAVTEE VSRNITGISD SASELARLAD EAQQSSASLA GLVEQQHQQL GKLKT
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