More than 300 homologs were found in PanDaTox collection
for query gene Pcar_0972 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  50.21 
 
 
723 aa  709    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  61.42 
 
 
740 aa  867    Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  100 
 
 
779 aa  1582    Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  41.94 
 
 
778 aa  549  1e-155  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  43.74 
 
 
706 aa  527  1e-148  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  39.81 
 
 
713 aa  521  1e-146  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
741 aa  487  1e-136  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  38.98 
 
 
731 aa  476  1e-133  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
730 aa  473  1e-132  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  39.63 
 
 
730 aa  468  9.999999999999999e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  58.99 
 
 
702 aa  409  1e-113  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
699 aa  402  9.999999999999999e-111  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0545  methyl-accepting chemotaxis protein (MCP)  63.13 
 
 
676 aa  374  1e-102  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  1.25556e-16  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  42.7 
 
 
695 aa  371  1e-101  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  53.65 
 
 
744 aa  369  1e-100  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  30.29 
 
 
712 aa  327  4.0000000000000003e-88  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.4 
 
 
665 aa  327  7e-88  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  28.89 
 
 
713 aa  327  8.000000000000001e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
602 aa  322  1.9999999999999998e-86  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
716 aa  320  5e-86  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007643  Rru_A2023  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
823 aa  320  5e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0346871  n/a   
 
 
-
 
NC_009012  Cthe_0039  methyl-accepting chemotaxis sensory transducer  45.6 
 
 
623 aa  318  3e-85  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.04 
 
 
636 aa  315  9.999999999999999e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.34 
 
 
667 aa  316  9.999999999999999e-85  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
649 aa  313  9e-84  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.43 
 
 
712 aa  309  1.0000000000000001e-82  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  46.45 
 
 
706 aa  308  3e-82  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  47.96 
 
 
740 aa  307  5.0000000000000004e-82  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  51.69 
 
 
567 aa  306  9.000000000000001e-82  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  48.85 
 
 
600 aa  301  4e-80  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  42.92 
 
 
759 aa  299  1e-79  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  29.6 
 
 
714 aa  285  3.0000000000000004e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
832 aa  283  1e-74  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  28.47 
 
 
657 aa  280  7e-74  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  30.16 
 
 
714 aa  279  2e-73  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  29.47 
 
 
714 aa  278  2e-73  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  28.75 
 
 
657 aa  278  3e-73  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2607  methyl-accepting chemotaxis protein (MCP)  46.47 
 
 
741 aa  273  6e-72  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  28.98 
 
 
695 aa  272  2e-71  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.83 
 
 
785 aa  268  2.9999999999999995e-70  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.31 
 
 
793 aa  268  4e-70  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_009654  Mmwyl1_0161  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
661 aa  266  8e-70  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.0270172 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  28.01 
 
 
712 aa  264  4.999999999999999e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2794  methyl-accepting chemotaxis sensory transducer  50.75 
 
 
717 aa  262  2e-68  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  29.99 
 
 
796 aa  261  3e-68  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_011369  Rleg2_0052  methyl-accepting chemotaxis sensory transducer  29.15 
 
 
778 aa  260  8e-68  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0947231 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
714 aa  257  5e-67  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
714 aa  257  7e-67  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  29.12 
 
 
738 aa  256  8e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_010623  Bphy_4943  methyl-accepting chemotaxis sensory transducer  31.39 
 
 
571 aa  256  1.0000000000000001e-66  Burkholderia phymatum STM815  Bacteria  normal  0.769292  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  27.85 
 
 
715 aa  255  2.0000000000000002e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  28.84 
 
 
714 aa  254  3e-66  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
688 aa  254  6e-66  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  28.69 
 
 
688 aa  253  1e-65  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  28.95 
 
 
688 aa  249  2e-64  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  29.11 
 
 
714 aa  249  2e-64  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  48.66 
 
 
516 aa  248  4e-64  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
688 aa  247  4.9999999999999997e-64  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  29.97 
 
 
749 aa  245  1.9999999999999999e-63  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_011891  A2cp1_2573  methyl-accepting chemotaxis sensory transducer  44.17 
 
 
621 aa  244  6e-63  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.650368  n/a   
 
 
-
 
NC_011365  Gdia_3445  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.24 
 
 
746 aa  243  1e-62  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.2502  normal 
 
 
-
 
NC_011145  AnaeK_2477  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
617 aa  242  2e-62  Anaeromyxobacter sp. K  Bacteria  normal  0.200364  n/a   
 
 
-
 
NC_004578  PSPTO_0912  methyl-accepting chemotaxis protein  41.85 
 
 
551 aa  241  2.9999999999999997e-62  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0785  histidine kinase, HAMP region: chemotaxis sensory transducer  45.1 
 
 
551 aa  238  3e-61  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.367078  normal 
 
 
-
 
NC_007760  Adeh_1380  methyl-accepting chemotaxis sensory transducer  44.51 
 
 
608 aa  236  2.0000000000000002e-60  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.236828  n/a   
 
 
-
 
NC_008346  Swol_1331  putative methyl-accepting chemotaxis sensory transducer  49.72 
 
 
370 aa  234  6e-60  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  28.65 
 
 
720 aa  231  3e-59  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
552 aa  231  6e-59  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
569 aa  230  7e-59  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
527 aa  229  1e-58  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_0902  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
550 aa  228  4e-58  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1991  chemotaxis sensory transducer  54.72 
 
 
661 aa  225  2e-57  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
544 aa  225  2e-57  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.56 
 
 
1123 aa  225  3e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  42.01 
 
 
583 aa  224  4.9999999999999996e-57  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  39.14 
 
 
767 aa  224  4.9999999999999996e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
664 aa  223  8e-57  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  42.95 
 
 
578 aa  223  9.999999999999999e-57  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
589 aa  223  9.999999999999999e-57  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0626  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.49 
 
 
726 aa  223  9.999999999999999e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  37.83 
 
 
664 aa  223  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  40.63 
 
 
575 aa  223  9.999999999999999e-57  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
553 aa  222  1.9999999999999999e-56  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
554 aa  222  1.9999999999999999e-56  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  38.96 
 
 
552 aa  221  3e-56  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  46.72 
 
 
863 aa  221  3e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  38.24 
 
 
678 aa  222  3e-56  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.21 
 
 
665 aa  221  3.9999999999999997e-56  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
610 aa  221  3.9999999999999997e-56  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  41.62 
 
 
860 aa  220  6e-56  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_011662  Tmz1t_1318  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
555 aa  220  6e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  45.36 
 
 
597 aa  221  6e-56  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
596 aa  220  7.999999999999999e-56  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
554 aa  219  1e-55  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  28.31 
 
 
701 aa  219  1e-55  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_013173  Dbac_1917  methyl-accepting chemotaxis sensory transducer  45.03 
 
 
677 aa  219  1e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.134066  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
657 aa  219  1e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  26.69 
 
 
720 aa  219  2e-55  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
559 aa  219  2e-55  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  38.77 
 
 
542 aa  219  2e-55  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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