Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1998 |
Symbol | |
ID | 5109889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2206701 |
End bp | 2208845 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503239 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001187491 |
Protein GI | 146307026 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0164438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTCA GCCGTCTTTC GATCCAATGG AAGATCACCC TGCTCGCCGG CCTCTGCCTG CTCGCCATCG TCACCCTGCT GGTGGGAGCA TCGCAGTATC AGTCCAGCCG CAGCGCCGCT TTGGTAGACA AGGCCAGCTC CAGCATGCTG GAGGAAAGCG CCAAGCTGCG CCTGCAGGCA CGTGGCGAGC TGCAGGCAAT GCGCATCCAG CGCTACTTCA TGGACGCCTA TCAATACGGC AAGGGCTTTT CCCGGCAGAT CCTGTTCCTG CGCGAACAGG CCGAGAAACG CTTTCTCGAT GCCTTCGACC TGCGCGAAGA CCTGACGCGC CAGGTACGCA CCAGCCTGGA GGCCAACCCC GCCCTGCTCG GCCTTTATCT GGTATTCGAA CCCAATGCGC TGGACGGCAA GGACGAACTG TTCGCCGACC AGGCCGAGCT GGGCAGCAAC GACGCCGGAC GTTTCTCGCT GTACTGGGCG CAGCCCACCC CGGGCCAGCT CGAGTCCGAA TCGATGACCG AACAGCTGCT CGGCGACACC ACGCCCGGGG CCAACGGCGT CGCCTACAAC GCCTGGTACA CCTGCCCGCG CGAAACCCGC AAGACCTGCG TGCTGGAGCC CTACTACGAC GAGGTCGGCG GCCAGCAGAC ACTGATGACC AGCATCGCCT TCCCCCTGGA ACTGGACGGC AAGGTGATCG GCGTGATGGG CGTGGACATC AGCCTGGCCA GCCTGCAGCA GATCAGCCTG GAGGCCAATC GCGACCTGTA CGACGGCCAG GGCCATATCA GCATCTTCAG CCCCGGCGCC CTGCTCGCCG GCCACAGCCG CGATCAGAGC CTGCTCAGCC TGCCGGTCGC CCGAGCCTAT GCCGAGCATG CCAGCGAACT GGCCGCGCTG ATCAAGGCCG GCGGCCAGGC GGAGCTGCAT CACGGCGACA TGCTGCGCGT CGTCAGCCCG TTCAGGCCGA TCCCCGAAGC CCAGCCCTGG AGCGTGCTGC TCGAGGTGCC GGAGAAGGTG CTGCTGGCCC GCGCCATCGA ACTCGGTCAT CAGCTCGATG CCAACCGTGC CAGCGACAGC CTGACCGCCC TGCTGATGGG GCTGCTGGCC GTGGTGGCCG GTCTGCTGCT GATGTGGCTT ACGGCACGCG GCGTGACCCG ACCGATTCTC GGTGTGGCCG CCATGCTCAA GGACATCGCC AGTGGCGAAG GCGACCTGAC CCGTCGTCTG CAATACGCCA GGCAGGATGA GTTGGGCGAG CTGGCCGGCT GGTTCAACCG TTTTCTCGAC AAGCTGCAGC CGATCATCGC CGACGTGAAG AGCAGCGTGC TCGATGCGCG CAGCACCGCC GACCAGTCAG CCGCCATCGC CAGCCAGACC AGCGCCGGCA TGCAGCAGCA GTATCGCGAG GTCGATCAGG TGGCCACCGC CTTCCAGGAA ATGAGCGCCA CCGCCCAGGA CGTGGCGCAC AACGCCGCAC AGGCAGCGGA GGCCGCACGC AACGCCGACC AGGCCAGCCG TGAAGGCCTG CAGGTGATCG ACAGGACCAC CAGCAGCATC GAGTTGCTGG CCAACGAAAT GAACGTTGCC ATGCAGGAAG TCGAGGGCCT GGCCAGCAGC AGCGAGCAGA TCGGCTCGGT GCTCGAGGTG ATTCGCTCGA TCGCCGAGCA GACCAACCTG CTCGCCCTCA ACGCGGCCAT CGAAGCAGCC CGTGCCGGCG AGGCCGGTCG CGGCTTCGCG GTGGTCGCCG ACGAGGTGCG CAACCTGGCC AAACGCACCC AGGACTCGGT CGAAGAAATC CGCCAGGTGA TCGAGGGCCT GCAGAACGGC ACCCGTGAGG TGGTCAGCAC CATGCACAGC AGCCATCGCC AGGCCCAGGG CAGCGTCGAG CAGGTCAGCC AGGCCGTGGC GGCGCTGCAG CGCATCGGTC AGGCCGTCAG CCTGATCACC GACATGAACC TACAGATCGC CAGCGCCGCG GAGGAGCAGA GTTCGGTGGC CGAGGAGATC AACCGCAACG TCGCCTCGAT CCGCGACGTC ACCGAGGCCA TTACCGCGCA GGCCGACGAG TCGGCGCAGG TCAGCCAGAA CCTCAATCGC CTGGCCAATC ACCAGCAGAG CCTGATGGAT CAGTTCCGCG TCTGA
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Protein sequence | MLFSRLSIQW KITLLAGLCL LAIVTLLVGA SQYQSSRSAA LVDKASSSML EESAKLRLQA RGELQAMRIQ RYFMDAYQYG KGFSRQILFL REQAEKRFLD AFDLREDLTR QVRTSLEANP ALLGLYLVFE PNALDGKDEL FADQAELGSN DAGRFSLYWA QPTPGQLESE SMTEQLLGDT TPGANGVAYN AWYTCPRETR KTCVLEPYYD EVGGQQTLMT SIAFPLELDG KVIGVMGVDI SLASLQQISL EANRDLYDGQ GHISIFSPGA LLAGHSRDQS LLSLPVARAY AEHASELAAL IKAGGQAELH HGDMLRVVSP FRPIPEAQPW SVLLEVPEKV LLARAIELGH QLDANRASDS LTALLMGLLA VVAGLLLMWL TARGVTRPIL GVAAMLKDIA SGEGDLTRRL QYARQDELGE LAGWFNRFLD KLQPIIADVK SSVLDARSTA DQSAAIASQT SAGMQQQYRE VDQVATAFQE MSATAQDVAH NAAQAAEAAR NADQASREGL QVIDRTTSSI ELLANEMNVA MQEVEGLASS SEQIGSVLEV IRSIAEQTNL LALNAAIEAA RAGEAGRGFA VVADEVRNLA KRTQDSVEEI RQVIEGLQNG TREVVSTMHS SHRQAQGSVE QVSQAVAALQ RIGQAVSLIT DMNLQIASAA EEQSSVAEEI NRNVASIRDV TEAITAQADE SAQVSQNLNR LANHQQSLMD QFRV
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