Gene Rpal_4783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4783 
Symbol 
ID6412469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5145801 
End bp5147993 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content65% 
IMG OID642714661 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001993748 
Protein GI192293143 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCT CGTTCAAATC CATCCGCAAA ATTCAGGTCA AGATCGCGCT GGTCGCCGGC 
CTCTGCCTGA CCGGCGCCAG CCTGGTCCTG ATCGGCTACA GCGTCCTGTC CGCGCAGAGC
ACACATCACT ATGTCACCGC TGAAGTGATG AAACTGGTCG ATCAGCAGGC CAAGGAAAGC
CTGCTCAATC GGGCCAACTC CGAAGCCTCT GTGATCAAGG CCGAGCTTGA CCTCGGGCTC
GACTCCGCGC GCAACATGGC GCACGCCTTC GAAGTGTTGG CCGATCCGAA CAATGCGGGC
ACCACCGACG GCAACCGCCG CCTGCAGCTC AACGCGGTGC TCAAGAACAC GCTGGAGCAG
AACCCGGCGT TCAACGGCAC CTACTCGGCC TGGGAGCCGA ACGCGCTCGA CGGCAATGAC
GTCGCGTTCA AGGGCCGCCA GACGATGGGC TCGGACAACA CCGGCCGCTT CCTGCCGTAC
TGGACCCGCA GCGCCAGCGG TTCGATCGCG TTGCAGCCGC TGGTCGAATA CGACAGCCAG
GAGCGCCATC CGAACGGCCT GGTGAAGGGC GCATGGTTCA TCAATCCGAA GACGACCGGC
AAGGAGAACA TCCTCGGCCC GCTGCCCTAC ATCGTGCAAG GCAAGGCGGT GTTCCTCGCC
ACCATGTCGG TGCCGATCAA GATCGACGGC AAGTTCGTCG GCGTCGCCGG TGCGGACTAC
AATCTCAACT TCGTGCAGAA GCTCGCCACT CAGGCCAACC GCTCGCTGTT TGGCGGCAAG
GGCAAGGTCC TGATCCTCAA CGACACCGGT CTGATCGTCG CCAACAGCGC CAATCCGGAA
TCGATCGGCA AGGCGGCGTC GAGCGCCGAT CCGCGCTGGT CTGAGAGCTT GGCGATCGTC
AAGGAAGGCA AGGGCACGGT GCTCGATGAT CCGAAGTGGG AGAATGTCGA GATCTATTCG
CCGATCTCCG TGGGGCGCAC GGGCACGCCT TGGTCGGTGC TGATCTCGGT GCCGCGCAGC
GTGGTGCTGG CTTCGGCTAA TGAACTCGAC ACGGCGCTGA ACGACCGCGC CAACTCGGCG
ATATTCTGGC AGCTCGGCAC CGGCATCCTG GTGGTGGTAT TGGCCATCAC GGTGATCGCG
TTCGCGGCCC GCAGCATCGC AAGGCCGATC GGGGACTGCG CGAATTTCGC CGACGGCATT
GCCAAGGGCG AACTCGACCA GAAGCTCGAC ATCGAGCAGG CCGACGAGGT CGGTGTGCTT
GCCGCCTCGC TGCGCACCAT GCAGGGCGAG CTCAAAAGCA GTATCGCGCA ACGTGCCGAG
GATCAGGCCA ATGCCGATCG GACGCGGCAG CGCGACATGA ACGACATGGC CGACAAGTTC
GAGTCCGCGG TCGGCAGGAT CGTCGAAACG GTGTCGTCGG CCTCGACCGA ACTCGAAGTC
TCGGCCGGAC GGCTGACGAC CACGGCGGAG CGTTCGCAGC AACTGACCTC GATGGTCGCC
TCGGCGTCCG AAGAAGCTTC GTCGAACGTG CAGTCGGTTG CTACGGCCAC TGAGGAGATG
TCGGCGTCGG TCGACGAGAT CAGCCGGCAG GTGCAGGAAT CCTCACGCAT CGCCAATGAG
GCGGTCCACC AGGCCCAGAA GACCAACGAT CGGGTCGGCG AGCTCGCCAA GGCCGCGACC
CGGATCGGCG ACGTGGTCGA GCTGATCAAC ACCATCGCCG GCCAGACCAA TCTGCTGGCG
CTCAACGCCA CCATCGAGGC GGCGCGCGCC GGCGAAGCCG GCCGCGGTTT CGCGGTGGTG
GCCGCCGAGG TCAAGCAACT CGCCGAGCAG ACCGCGAAAG CGACCGGCGA GATCAGCGCG
CAGATCAGCG GCATCCAGTC GGCCACCGGG GAGTCGGTGA CGGCCATCAA GGAGATCACC
GACACGATCG GCCACATCTC CGAGATCGCC GGGTCGATCG CGTCCGCGGT CGAGCAGCAG
GGCGCCGCGA CTCGCGAGAT TTCGCGCAAC ATTCAGCAGG CGTCGCGCGG CACCAGTCAG
GTCACCGGCA ATATCAGCGA CGTGCAACGC GGCGCCAGCG AGACCGGCAG TGCGTCGTCG
CAGGTGCTGG CGGCGGCGCA GTCGCTCGCC GGCGACAGCA ATCTGCTCCG ACGCGAAGTC
GCCCGCTTCC TCGACACCAT CCGCGCCGCC TGA
 
Protein sequence
MSFSFKSIRK IQVKIALVAG LCLTGASLVL IGYSVLSAQS THHYVTAEVM KLVDQQAKES 
LLNRANSEAS VIKAELDLGL DSARNMAHAF EVLADPNNAG TTDGNRRLQL NAVLKNTLEQ
NPAFNGTYSA WEPNALDGND VAFKGRQTMG SDNTGRFLPY WTRSASGSIA LQPLVEYDSQ
ERHPNGLVKG AWFINPKTTG KENILGPLPY IVQGKAVFLA TMSVPIKIDG KFVGVAGADY
NLNFVQKLAT QANRSLFGGK GKVLILNDTG LIVANSANPE SIGKAASSAD PRWSESLAIV
KEGKGTVLDD PKWENVEIYS PISVGRTGTP WSVLISVPRS VVLASANELD TALNDRANSA
IFWQLGTGIL VVVLAITVIA FAARSIARPI GDCANFADGI AKGELDQKLD IEQADEVGVL
AASLRTMQGE LKSSIAQRAE DQANADRTRQ RDMNDMADKF ESAVGRIVET VSSASTELEV
SAGRLTTTAE RSQQLTSMVA SASEEASSNV QSVATATEEM SASVDEISRQ VQESSRIANE
AVHQAQKTND RVGELAKAAT RIGDVVELIN TIAGQTNLLA LNATIEAARA GEAGRGFAVV
AAEVKQLAEQ TAKATGEISA QISGIQSATG ESVTAIKEIT DTIGHISEIA GSIASAVEQQ
GAATREISRN IQQASRGTSQ VTGNISDVQR GASETGSASS QVLAAAQSLA GDSNLLRREV
ARFLDTIRAA