| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4783 |
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| Symbol | |
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| ID | 6412469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 5145801 |
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| End bp | 5147993 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714661 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001993748 |
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| Protein GI | 192293143 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTCT CGTTCAAATC CATCCGCAAA ATTCAGGTCA AGATCGCGCT GGTCGCCGGC
CTCTGCCTGA CCGGCGCCAG CCTGGTCCTG ATCGGCTACA GCGTCCTGTC CGCGCAGAGC
ACACATCACT ATGTCACCGC TGAAGTGATG AAACTGGTCG ATCAGCAGGC CAAGGAAAGC
CTGCTCAATC GGGCCAACTC CGAAGCCTCT GTGATCAAGG CCGAGCTTGA CCTCGGGCTC
GACTCCGCGC GCAACATGGC GCACGCCTTC GAAGTGTTGG CCGATCCGAA CAATGCGGGC
ACCACCGACG GCAACCGCCG CCTGCAGCTC AACGCGGTGC TCAAGAACAC GCTGGAGCAG
AACCCGGCGT TCAACGGCAC CTACTCGGCC TGGGAGCCGA ACGCGCTCGA CGGCAATGAC
GTCGCGTTCA AGGGCCGCCA GACGATGGGC TCGGACAACA CCGGCCGCTT CCTGCCGTAC
TGGACCCGCA GCGCCAGCGG TTCGATCGCG TTGCAGCCGC TGGTCGAATA CGACAGCCAG
GAGCGCCATC CGAACGGCCT GGTGAAGGGC GCATGGTTCA TCAATCCGAA GACGACCGGC
AAGGAGAACA TCCTCGGCCC GCTGCCCTAC ATCGTGCAAG GCAAGGCGGT GTTCCTCGCC
ACCATGTCGG TGCCGATCAA GATCGACGGC AAGTTCGTCG GCGTCGCCGG TGCGGACTAC
AATCTCAACT TCGTGCAGAA GCTCGCCACT CAGGCCAACC GCTCGCTGTT TGGCGGCAAG
GGCAAGGTCC TGATCCTCAA CGACACCGGT CTGATCGTCG CCAACAGCGC CAATCCGGAA
TCGATCGGCA AGGCGGCGTC GAGCGCCGAT CCGCGCTGGT CTGAGAGCTT GGCGATCGTC
AAGGAAGGCA AGGGCACGGT GCTCGATGAT CCGAAGTGGG AGAATGTCGA GATCTATTCG
CCGATCTCCG TGGGGCGCAC GGGCACGCCT TGGTCGGTGC TGATCTCGGT GCCGCGCAGC
GTGGTGCTGG CTTCGGCTAA TGAACTCGAC ACGGCGCTGA ACGACCGCGC CAACTCGGCG
ATATTCTGGC AGCTCGGCAC CGGCATCCTG GTGGTGGTAT TGGCCATCAC GGTGATCGCG
TTCGCGGCCC GCAGCATCGC AAGGCCGATC GGGGACTGCG CGAATTTCGC CGACGGCATT
GCCAAGGGCG AACTCGACCA GAAGCTCGAC ATCGAGCAGG CCGACGAGGT CGGTGTGCTT
GCCGCCTCGC TGCGCACCAT GCAGGGCGAG CTCAAAAGCA GTATCGCGCA ACGTGCCGAG
GATCAGGCCA ATGCCGATCG GACGCGGCAG CGCGACATGA ACGACATGGC CGACAAGTTC
GAGTCCGCGG TCGGCAGGAT CGTCGAAACG GTGTCGTCGG CCTCGACCGA ACTCGAAGTC
TCGGCCGGAC GGCTGACGAC CACGGCGGAG CGTTCGCAGC AACTGACCTC GATGGTCGCC
TCGGCGTCCG AAGAAGCTTC GTCGAACGTG CAGTCGGTTG CTACGGCCAC TGAGGAGATG
TCGGCGTCGG TCGACGAGAT CAGCCGGCAG GTGCAGGAAT CCTCACGCAT CGCCAATGAG
GCGGTCCACC AGGCCCAGAA GACCAACGAT CGGGTCGGCG AGCTCGCCAA GGCCGCGACC
CGGATCGGCG ACGTGGTCGA GCTGATCAAC ACCATCGCCG GCCAGACCAA TCTGCTGGCG
CTCAACGCCA CCATCGAGGC GGCGCGCGCC GGCGAAGCCG GCCGCGGTTT CGCGGTGGTG
GCCGCCGAGG TCAAGCAACT CGCCGAGCAG ACCGCGAAAG CGACCGGCGA GATCAGCGCG
CAGATCAGCG GCATCCAGTC GGCCACCGGG GAGTCGGTGA CGGCCATCAA GGAGATCACC
GACACGATCG GCCACATCTC CGAGATCGCC GGGTCGATCG CGTCCGCGGT CGAGCAGCAG
GGCGCCGCGA CTCGCGAGAT TTCGCGCAAC ATTCAGCAGG CGTCGCGCGG CACCAGTCAG
GTCACCGGCA ATATCAGCGA CGTGCAACGC GGCGCCAGCG AGACCGGCAG TGCGTCGTCG
CAGGTGCTGG CGGCGGCGCA GTCGCTCGCC GGCGACAGCA ATCTGCTCCG ACGCGAAGTC
GCCCGCTTCC TCGACACCAT CCGCGCCGCC TGA
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| Protein sequence | MSFSFKSIRK IQVKIALVAG LCLTGASLVL IGYSVLSAQS THHYVTAEVM KLVDQQAKES
LLNRANSEAS VIKAELDLGL DSARNMAHAF EVLADPNNAG TTDGNRRLQL NAVLKNTLEQ
NPAFNGTYSA WEPNALDGND VAFKGRQTMG SDNTGRFLPY WTRSASGSIA LQPLVEYDSQ
ERHPNGLVKG AWFINPKTTG KENILGPLPY IVQGKAVFLA TMSVPIKIDG KFVGVAGADY
NLNFVQKLAT QANRSLFGGK GKVLILNDTG LIVANSANPE SIGKAASSAD PRWSESLAIV
KEGKGTVLDD PKWENVEIYS PISVGRTGTP WSVLISVPRS VVLASANELD TALNDRANSA
IFWQLGTGIL VVVLAITVIA FAARSIARPI GDCANFADGI AKGELDQKLD IEQADEVGVL
AASLRTMQGE LKSSIAQRAE DQANADRTRQ RDMNDMADKF ESAVGRIVET VSSASTELEV
SAGRLTTTAE RSQQLTSMVA SASEEASSNV QSVATATEEM SASVDEISRQ VQESSRIANE
AVHQAQKTND RVGELAKAAT RIGDVVELIN TIAGQTNLLA LNATIEAARA GEAGRGFAVV
AAEVKQLAEQ TAKATGEISA QISGIQSATG ESVTAIKEIT DTIGHISEIA GSIASAVEQQ
GAATREISRN IQQASRGTSQ VTGNISDVQR GASETGSASS QVLAAAQSLA GDSNLLRREV
ARFLDTIRAA
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