Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_0585 |
Symbol | |
ID | 3724078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 708767 |
End bp | 710887 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637750170 |
Product | methyl-accepting chemotaxis protein (MCP) |
Protein accession | YP_356014 |
Protein GI | 77918199 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000132912 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGATTC GATCCATTCA ACTGAAAATC ACCCTGTTTG CCGGGTTTTG CCTGGTTCTT ACCGCTGGAA TCATTATTCT GAATTCCGCC ATGACGGTTC GCCAGCAGGC CATGCGTGTC GCGGAAGGCC ACGCTCAGGC CGCCGCTGAA AAATATGCGG GCGATATTCT TTCCAGGTTT GAAGAGGCCC ATGCGCTGAC CCACGACATG GCCGCCATTT TGGGCGCGAC AAAGAGCAAA ACGGCACCAA TTCAACTGGA ACGCGTCGAA GTGCAGGCTC TGTTGCGGCA AGCCTTCCTG CAAAACCCGC AGTTTTTTGC CGGCGGGATG GCATGGGAGC CGAATGCCTT TGACGGCAGG GATGCAGAGT TCGCCGGCAA TGGGATCTAT GATGCGTCGG GGCGTATGAT CTCCTATTGG TATCAGGACG GTACCAACGG CGTCACTTAT GACATTCTGG TGGACTACGA TAATGAAGAG GCGGGGACTT GGTATTTTTT GCCCAGGAAA TTGCACCATG AAATCCTCAC CGAGCCGTAT TCTTATCCTG TCGCCGGCAC CGAAGTTCTT ATGTCGACGG TGGCTTCTCC CATTATGGTG GACGGTCAAT TTTACGGGGT GACAACCGTC GATTTCACCC TTGGATTCCT ACAGCAGCTG GCGGATGACA ACGCGATTTT CAATGGTGCC GGCAAGATCG CCATTATCAC CCATGGAGGC ACGGTGGCGG GCATGACCGG CCATCCCGAA GCCGGGGGCA AAGCCTGGGC CGAGAGGGAT GCCATGGGGG CCTCCTATTA CGACCGGTTG ATTAAGGGAG AGACGGTTCT CGATTGGAGT AAGCGGGGCC TGGAGGTGTT TATACCCCTG AACCTGGGCA AGACTGGGAC ACCCTGGTGG GTGCATGTCA TGGTCCCTCG CGACGTGGCG CTGGCGAACG TAACCTCTGT CATGTGGCAT GAGATCGGCA TGGGGTCGAT ATGCATTGTG GTGGCCTTGT TGTTGCTCTG GGGGATTGCC CGCGGTCTCG CCGGGCCGAT CCGCAAGGGT GCGGACATGG CACGGGAAAT CGCCCGGGGT GACCTTTCGC AGCGCCTGGT GCTCAAGCAG CGGGATGAAG TCGGGGTACT CGCAGCGGCC CTGAACGATA TGGCCGTATC CCTGCAACAA AAGGCGGAAA TGGCCGAGAC GATTTCCCAG GGCAACCTGA ATATCGACGT GCCGCTGGCG TCGGAGAAAG ATCAGCTTGG CAAAGCGCTG CAGCGGATGA CCGGCAACCT CAATGCTTTG CTGGCTCAGG TACAGATGAC CGGGGAGCAG GTCATGGTGG GGACAACCCA GATTTCCGAG GCCAGTGCGT CTCTTTCGCA AGGCGCTACG GAATCGGCCG CCTCCATGGA AGAGATTGCG GCCTCCATGA CCCAGCTCAC CACCCAGACA ACCAACAATG CCGACAATGC CGAGCAAGCC AAAAAACTGT CCCTGAGAAG CAAACAGGGA GCGGTGCAGG GAGATGCCCT GATGGCGGAT ATGGTGCATG CCATGGCCGA AATCGAGCAT TCCGGCAAGG GCATTTCCAA AATCATCAAG GTCATCGACG ATATCGCTTT TCAGACCAAC CTTCTTGCCT TGAATGCCGC TGTTGAAGCG GCCCGGGCCG GACAGCACGG TAAGGGCTTT GCGGTTGTCG CCGAGGAGGT GCGAAGCCTG GCGGCGCGTA GCGCCAGAGC GGCCCACGAA ACATCGGATT TAATCGAAAA TTCGGTTGTT AAAACCCATA ATGGTGCCGA AATCGCGCGT AAAACCGCCG ATGCTCTTGC CGAAATTGTC GCCGCTACGA CCAAGGTGTC CGATCTGGTG GCTGAAATTT CAGCATCGTC CCAAGAACAG TCGCGTGGTC TGCAGGAGAT CAATAACGGG TTGGGGCAGA TCGAGCAGGT AACGCAGCAG AACACGGCAT ATGCCGAAGA AACGGCGGCA TCGACGGAGG AACTTTCCAG CCAGGTGGTT GAGCTGAATC GCATGCTGGA ACAGTTCAAG CTTAAAGAGG AAGGGGCCGG TGGCCATCTG GATATGGCAA GGCCTACCGA AACCCCGGCT TTGCCTGGAG GTGCCGCATA G
|
Protein sequence | MKIRSIQLKI TLFAGFCLVL TAGIIILNSA MTVRQQAMRV AEGHAQAAAE KYAGDILSRF EEAHALTHDM AAILGATKSK TAPIQLERVE VQALLRQAFL QNPQFFAGGM AWEPNAFDGR DAEFAGNGIY DASGRMISYW YQDGTNGVTY DILVDYDNEE AGTWYFLPRK LHHEILTEPY SYPVAGTEVL MSTVASPIMV DGQFYGVTTV DFTLGFLQQL ADDNAIFNGA GKIAIITHGG TVAGMTGHPE AGGKAWAERD AMGASYYDRL IKGETVLDWS KRGLEVFIPL NLGKTGTPWW VHVMVPRDVA LANVTSVMWH EIGMGSICIV VALLLLWGIA RGLAGPIRKG ADMAREIARG DLSQRLVLKQ RDEVGVLAAA LNDMAVSLQQ KAEMAETISQ GNLNIDVPLA SEKDQLGKAL QRMTGNLNAL LAQVQMTGEQ VMVGTTQISE ASASLSQGAT ESAASMEEIA ASMTQLTTQT TNNADNAEQA KKLSLRSKQG AVQGDALMAD MVHAMAEIEH SGKGISKIIK VIDDIAFQTN LLALNAAVEA ARAGQHGKGF AVVAEEVRSL AARSARAAHE TSDLIENSVV KTHNGAEIAR KTADALAEIV AATTKVSDLV AEISASSQEQ SRGLQEINNG LGQIEQVTQQ NTAYAEETAA STEELSSQVV ELNRMLEQFK LKEEGAGGHL DMARPTETPA LPGGAA
|
| |