Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1321 |
Symbol | |
ID | 3907829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 1506578 |
End bp | 1508770 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883215 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_484942 |
Protein GI | 86748446 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0177086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.260794 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCT CTTTCCGTGC CATCAAGACC GTGCAGCTCA AGATCGCTCT CGTATCGGGC CTGTGCCTGA CCGGCGCCAG CTTGATGCTG ATCGTCTACA GCATCGTTTC GGCACAGAGC ACCAACAGCT ACGTCACCAC GGAAGTCATG CAACTGGTCG ACAGTCAGAC CAAAGAGAGC CTGCTGAACC GCGGCTCAAC CGAAGCCGGT TCGATCAAAT CGGAGCTCGA CGTCGGCCTC GATGCCGCCC GCACCATGGC CCATGCGTTC GCCGTGCTCG CCGACGCCAA GAACAGCGGC ACGCCGGACA GCAATCGCCG GGCCCAGCTC AATGCGGTGC TGAACAACAC CTTGAAACAG AACCCCGCCT TCAACGGCAC CTATTCGGCA TGGGAGCCGA ATGCCCTGGA CGGCAACGAC GCGGCCTTCA AAGGCCGTCA GGACATGGGA TCCGATACCA CGGGTCGCTT CCTGCCGTAC TGGACCCGGG GCGCCAGTGG CGCGATCGCG GTTCAGCCTC TCGTCGAATA CGACAGCAGC GAACGCCACC CCAATGGTCT GGTGAAGGGG GCGTGGTTCA TCAATCCGCA AACCACCGGC AAGGAAAACA TCCTGGGGCC GCTGCCCTAC ATTGTTCAAG GCAAGCAGGT ATTTCTCGCG ACGATGTCGG TGCCGATCAT GATCGGCGGC AAGTTCGTCG GTGTCGCGGG CGCCGACTAC AATCTGGATT TCGTGCAGAA GCTCGCCAAG CAGGTCAACG CATCGCTGTA TGACGGCAAG GGCAAGGTGG CGATCATCAA CAACACCGGC CTGATCGTCG CCAACAGCGC CAATGATGCG ACGATCGGCA AGCGCGCGGA GGAGGCCGAT CCGCGCTGGG CCGGTAGCCT CGCCATCGTG CAATCCGGCA AGGGCAAGGT GCTCGACGAT CCGAAATCGA AGGACGTCGA AGTGTATTCG CCGATCAATG TCGGCAGCAC CGGAACGCCC TGGTCGGTGT TGATCTCGGT GCCGCGGGAC GTGGTTCTGG CGTCCGCGAA GAAGCTGGAC AATTCGCTCA ACGACAAGGC GGCGTCGAGC ATGTTCTGGC AGATCGGCGC CGGACTTCTG GTCGTCGTCC TCGGCATCGT CGTGATCGCG CTCGCGGCGC GCCGCATTGC CCGGCCGATC GGCAGCTGCG CGGAGTTTGC GGACGGCATC GCCCGCGGCG ATCTCGAGCA GAAACTCGCC ATCGAGCAGG CTGATGAAGT CGGCATCCTG GCGAACTCGC TGCGCACCAT GCAGGGCGAA TTGAAGCGCA GCATTGCGCA GCGTGCCGAG GACCAGGCAA ATGCCGATGT CACCCGCAAG CGCGCGATGA ACGAGATGGC CGACAATTTC GAAACTGCTG TCGGTCGGAT CGTCGAAACG GTGTCCGCGG CCTCGAGCGA ACTCGAATTG TCCGCAGGCA CGCTGGCCTC GACGGCGGAG CGCTCACAGC AACTCACCTC GGTGGTTGCG GCAGCGTCGG AGGAAGCCTC GACCAACGTC CAGTCGGTCG CCTCCGCGAC CGAGGAAATG GCCTCATCCG TCAACGAGAT CAGCCGGCAA GTGCAGGATT CCTCCCGGAT TGCCACCGAG GCCGTTGCGC AAGCGCAGCG GACCAACGAT CGCGTCGGAG AACTGGCGAA GGCCGCTGCG CGAATCGGCG ACGTCGTCGA ATTGATCAAT ACGATCGCGG GCCAGACCAA TCTGCTCGCG CTCAATGCCA CGATCGAGGC GGCGCGCGCC GGCGAGGCCG GCCGCGGCTT CGCCGTGGTG GCCTCCGAGG TCAAGGCTCT GGCCGAACAG ACCGCCAAGG CGACCGGCGA AATCAGCGCC CAGATCGGTG GCATTCAGAC CGCGACCGAC GAATCGGTGG TGGCGATCAG GGAAATCGGC GACACCATCG CGCGGATCTC CGAGATCGCT GCAACGATCG CATCTGCCGT CGAAGAGCAG GGCGCCGCCA CGCAGGAGAT TTCCCGCAAT GTGCAGGAGG CCTCGCGCGG CACCGCCGAA GTCACGGCGA ATGTCGTCAA TGTGCAGCGC GGTGCCAGCG AGACCGGCAC CGCCTCGTCA CAGGTCCTGG AGGCAGCGAA GTCGCTGTCC GGCGAAAGCA GTCGGCTCAA GCACGAAGTC GGGCAGTTCC TGAATTCGGT CCGCGCGGCT TAG
|
Protein sequence | MNFSFRAIKT VQLKIALVSG LCLTGASLML IVYSIVSAQS TNSYVTTEVM QLVDSQTKES LLNRGSTEAG SIKSELDVGL DAARTMAHAF AVLADAKNSG TPDSNRRAQL NAVLNNTLKQ NPAFNGTYSA WEPNALDGND AAFKGRQDMG SDTTGRFLPY WTRGASGAIA VQPLVEYDSS ERHPNGLVKG AWFINPQTTG KENILGPLPY IVQGKQVFLA TMSVPIMIGG KFVGVAGADY NLDFVQKLAK QVNASLYDGK GKVAIINNTG LIVANSANDA TIGKRAEEAD PRWAGSLAIV QSGKGKVLDD PKSKDVEVYS PINVGSTGTP WSVLISVPRD VVLASAKKLD NSLNDKAASS MFWQIGAGLL VVVLGIVVIA LAARRIARPI GSCAEFADGI ARGDLEQKLA IEQADEVGIL ANSLRTMQGE LKRSIAQRAE DQANADVTRK RAMNEMADNF ETAVGRIVET VSAASSELEL SAGTLASTAE RSQQLTSVVA AASEEASTNV QSVASATEEM ASSVNEISRQ VQDSSRIATE AVAQAQRTND RVGELAKAAA RIGDVVELIN TIAGQTNLLA LNATIEAARA GEAGRGFAVV ASEVKALAEQ TAKATGEISA QIGGIQTATD ESVVAIREIG DTIARISEIA ATIASAVEEQ GAATQEISRN VQEASRGTAE VTANVVNVQR GASETGTASS QVLEAAKSLS GESSRLKHEV GQFLNSVRAA
|
| |