Gene RPB_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1321 
Symbol 
ID3907829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1506578 
End bp1508770 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content64% 
IMG OID637883215 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_484942 
Protein GI86748446 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0177086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.260794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT CTTTCCGTGC CATCAAGACC GTGCAGCTCA AGATCGCTCT CGTATCGGGC 
CTGTGCCTGA CCGGCGCCAG CTTGATGCTG ATCGTCTACA GCATCGTTTC GGCACAGAGC
ACCAACAGCT ACGTCACCAC GGAAGTCATG CAACTGGTCG ACAGTCAGAC CAAAGAGAGC
CTGCTGAACC GCGGCTCAAC CGAAGCCGGT TCGATCAAAT CGGAGCTCGA CGTCGGCCTC
GATGCCGCCC GCACCATGGC CCATGCGTTC GCCGTGCTCG CCGACGCCAA GAACAGCGGC
ACGCCGGACA GCAATCGCCG GGCCCAGCTC AATGCGGTGC TGAACAACAC CTTGAAACAG
AACCCCGCCT TCAACGGCAC CTATTCGGCA TGGGAGCCGA ATGCCCTGGA CGGCAACGAC
GCGGCCTTCA AAGGCCGTCA GGACATGGGA TCCGATACCA CGGGTCGCTT CCTGCCGTAC
TGGACCCGGG GCGCCAGTGG CGCGATCGCG GTTCAGCCTC TCGTCGAATA CGACAGCAGC
GAACGCCACC CCAATGGTCT GGTGAAGGGG GCGTGGTTCA TCAATCCGCA AACCACCGGC
AAGGAAAACA TCCTGGGGCC GCTGCCCTAC ATTGTTCAAG GCAAGCAGGT ATTTCTCGCG
ACGATGTCGG TGCCGATCAT GATCGGCGGC AAGTTCGTCG GTGTCGCGGG CGCCGACTAC
AATCTGGATT TCGTGCAGAA GCTCGCCAAG CAGGTCAACG CATCGCTGTA TGACGGCAAG
GGCAAGGTGG CGATCATCAA CAACACCGGC CTGATCGTCG CCAACAGCGC CAATGATGCG
ACGATCGGCA AGCGCGCGGA GGAGGCCGAT CCGCGCTGGG CCGGTAGCCT CGCCATCGTG
CAATCCGGCA AGGGCAAGGT GCTCGACGAT CCGAAATCGA AGGACGTCGA AGTGTATTCG
CCGATCAATG TCGGCAGCAC CGGAACGCCC TGGTCGGTGT TGATCTCGGT GCCGCGGGAC
GTGGTTCTGG CGTCCGCGAA GAAGCTGGAC AATTCGCTCA ACGACAAGGC GGCGTCGAGC
ATGTTCTGGC AGATCGGCGC CGGACTTCTG GTCGTCGTCC TCGGCATCGT CGTGATCGCG
CTCGCGGCGC GCCGCATTGC CCGGCCGATC GGCAGCTGCG CGGAGTTTGC GGACGGCATC
GCCCGCGGCG ATCTCGAGCA GAAACTCGCC ATCGAGCAGG CTGATGAAGT CGGCATCCTG
GCGAACTCGC TGCGCACCAT GCAGGGCGAA TTGAAGCGCA GCATTGCGCA GCGTGCCGAG
GACCAGGCAA ATGCCGATGT CACCCGCAAG CGCGCGATGA ACGAGATGGC CGACAATTTC
GAAACTGCTG TCGGTCGGAT CGTCGAAACG GTGTCCGCGG CCTCGAGCGA ACTCGAATTG
TCCGCAGGCA CGCTGGCCTC GACGGCGGAG CGCTCACAGC AACTCACCTC GGTGGTTGCG
GCAGCGTCGG AGGAAGCCTC GACCAACGTC CAGTCGGTCG CCTCCGCGAC CGAGGAAATG
GCCTCATCCG TCAACGAGAT CAGCCGGCAA GTGCAGGATT CCTCCCGGAT TGCCACCGAG
GCCGTTGCGC AAGCGCAGCG GACCAACGAT CGCGTCGGAG AACTGGCGAA GGCCGCTGCG
CGAATCGGCG ACGTCGTCGA ATTGATCAAT ACGATCGCGG GCCAGACCAA TCTGCTCGCG
CTCAATGCCA CGATCGAGGC GGCGCGCGCC GGCGAGGCCG GCCGCGGCTT CGCCGTGGTG
GCCTCCGAGG TCAAGGCTCT GGCCGAACAG ACCGCCAAGG CGACCGGCGA AATCAGCGCC
CAGATCGGTG GCATTCAGAC CGCGACCGAC GAATCGGTGG TGGCGATCAG GGAAATCGGC
GACACCATCG CGCGGATCTC CGAGATCGCT GCAACGATCG CATCTGCCGT CGAAGAGCAG
GGCGCCGCCA CGCAGGAGAT TTCCCGCAAT GTGCAGGAGG CCTCGCGCGG CACCGCCGAA
GTCACGGCGA ATGTCGTCAA TGTGCAGCGC GGTGCCAGCG AGACCGGCAC CGCCTCGTCA
CAGGTCCTGG AGGCAGCGAA GTCGCTGTCC GGCGAAAGCA GTCGGCTCAA GCACGAAGTC
GGGCAGTTCC TGAATTCGGT CCGCGCGGCT TAG
 
Protein sequence
MNFSFRAIKT VQLKIALVSG LCLTGASLML IVYSIVSAQS TNSYVTTEVM QLVDSQTKES 
LLNRGSTEAG SIKSELDVGL DAARTMAHAF AVLADAKNSG TPDSNRRAQL NAVLNNTLKQ
NPAFNGTYSA WEPNALDGND AAFKGRQDMG SDTTGRFLPY WTRGASGAIA VQPLVEYDSS
ERHPNGLVKG AWFINPQTTG KENILGPLPY IVQGKQVFLA TMSVPIMIGG KFVGVAGADY
NLDFVQKLAK QVNASLYDGK GKVAIINNTG LIVANSANDA TIGKRAEEAD PRWAGSLAIV
QSGKGKVLDD PKSKDVEVYS PINVGSTGTP WSVLISVPRD VVLASAKKLD NSLNDKAASS
MFWQIGAGLL VVVLGIVVIA LAARRIARPI GSCAEFADGI ARGDLEQKLA IEQADEVGIL
ANSLRTMQGE LKRSIAQRAE DQANADVTRK RAMNEMADNF ETAVGRIVET VSAASSELEL
SAGTLASTAE RSQQLTSVVA AASEEASTNV QSVASATEEM ASSVNEISRQ VQDSSRIATE
AVAQAQRTND RVGELAKAAA RIGDVVELIN TIAGQTNLLA LNATIEAARA GEAGRGFAVV
ASEVKALAEQ TAKATGEISA QIGGIQTATD ESVVAIREIG DTIARISEIA ATIASAVEEQ
GAATQEISRN VQEASRGTAE VTANVVNVQR GASETGTASS QVLEAAKSLS GESSRLKHEV
GQFLNSVRAA