More than 300 homologs were found in PanDaTox collection
for query gene Ssed_3827 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  100 
 
 
695 aa  1411    Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  34.02 
 
 
713 aa  407  1.0000000000000001e-112  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  35.69 
 
 
712 aa  404  1e-111  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  35.35 
 
 
712 aa  397  1e-109  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  35.49 
 
 
716 aa  386  1e-106  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  33.47 
 
 
738 aa  361  3e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  33.19 
 
 
714 aa  353  8e-96  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
714 aa  350  7e-95  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  33.29 
 
 
714 aa  348  1e-94  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
688 aa  346  8e-94  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
688 aa  346  8e-94  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  33.28 
 
 
715 aa  346  8e-94  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
688 aa  342  1e-92  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  32.48 
 
 
688 aa  342  2e-92  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
707 aa  339  9.999999999999999e-92  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
706 aa  337  5e-91  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
706 aa  335  1e-90  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  32.34 
 
 
706 aa  335  1e-90  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  33.52 
 
 
706 aa  334  3e-90  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  32.44 
 
 
706 aa  331  2e-89  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
706 aa  332  2e-89  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
706 aa  330  5.0000000000000004e-89  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
705 aa  328  1.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  33.1 
 
 
706 aa  329  1.0000000000000001e-88  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  29.97 
 
 
699 aa  324  4e-87  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  34.52 
 
 
712 aa  323  5e-87  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
705 aa  321  3e-86  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  31.24 
 
 
714 aa  320  3.9999999999999996e-86  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  31.17 
 
 
714 aa  320  5e-86  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  30.89 
 
 
714 aa  320  7e-86  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
705 aa  319  1e-85  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
706 aa  313  4.999999999999999e-84  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  32.34 
 
 
705 aa  313  5.999999999999999e-84  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_003910  CPS_4675  methyl-accepting chemotaxis protein  32.88 
 
 
701 aa  313  9e-84  Colwellia psychrerythraea 34H  Bacteria  normal  0.595763  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  33.09 
 
 
730 aa  307  4.0000000000000004e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  32.04 
 
 
720 aa  307  4.0000000000000004e-82  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
714 aa  305  1.0000000000000001e-81  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01109  methyl-accepting chemotaxis protein  30.72 
 
 
743 aa  305  3.0000000000000004e-81  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566074  n/a   
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  32.16 
 
 
716 aa  297  4e-79  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
741 aa  296  7e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  30.24 
 
 
731 aa  290  4e-77  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  29.9 
 
 
704 aa  286  7e-76  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  29.06 
 
 
713 aa  286  1.0000000000000001e-75  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  29.04 
 
 
740 aa  280  6e-74  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  30.77 
 
 
697 aa  277  5e-73  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1450  methyl-accepting chemotaxis protein  30.69 
 
 
706 aa  277  5e-73  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000571496  n/a   
 
 
-
 
NC_013456  VEA_003063  methyl-accepting chemotaxis protein  34.26 
 
 
682 aa  275  2.0000000000000002e-72  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02788  hypothetical protein  34.28 
 
 
698 aa  269  2e-70  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  29.52 
 
 
730 aa  268  2.9999999999999995e-70  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  40.81 
 
 
626 aa  262  2e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  28.98 
 
 
779 aa  261  2e-68  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  34.29 
 
 
671 aa  256  8e-67  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
638 aa  251  3e-65  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
541 aa  250  7e-65  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  44.15 
 
 
634 aa  249  9e-65  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
634 aa  247  4.9999999999999997e-64  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  43.57 
 
 
634 aa  247  6e-64  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
637 aa  246  9.999999999999999e-64  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007005  Psyr_2682  histidine kinase, HAMP region: chemotaxis sensory transducer  28.76 
 
 
723 aa  244  3.9999999999999997e-63  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.121525  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  42.39 
 
 
637 aa  241  5e-62  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.69 
 
 
626 aa  239  1e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
638 aa  238  2e-61  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.4 
 
 
627 aa  238  3e-61  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  32 
 
 
633 aa  237  5.0000000000000005e-61  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.48 
 
 
626 aa  237  7e-61  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
631 aa  235  2.0000000000000002e-60  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  32 
 
 
645 aa  234  3e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
552 aa  234  3e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
636 aa  232  1e-59  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  39.19 
 
 
544 aa  233  1e-59  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.33 
 
 
627 aa  231  3e-59  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  37.89 
 
 
628 aa  231  3e-59  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
638 aa  230  8e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  38.75 
 
 
629 aa  230  8e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  38.44 
 
 
628 aa  229  1e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  38.75 
 
 
640 aa  229  1e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  40.87 
 
 
555 aa  228  2e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  41.14 
 
 
639 aa  228  3e-58  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  46.41 
 
 
633 aa  227  4e-58  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
640 aa  227  4e-58  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  46.41 
 
 
633 aa  227  5.0000000000000005e-58  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  46.41 
 
 
633 aa  227  5.0000000000000005e-58  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  37.02 
 
 
632 aa  227  6e-58  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  40.4 
 
 
654 aa  227  6e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  32.9 
 
 
627 aa  226  1e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
627 aa  225  2e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  32.59 
 
 
639 aa  225  2e-57  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  40.62 
 
 
628 aa  224  6e-57  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009052  Sbal_3773  methyl-accepting chemotaxis sensory transducer  46.41 
 
 
633 aa  224  6e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  38.24 
 
 
533 aa  223  7e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
650 aa  223  9e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  38.75 
 
 
642 aa  222  9.999999999999999e-57  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  42.51 
 
 
624 aa  222  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.73 
 
 
623 aa  223  9.999999999999999e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
636 aa  223  9.999999999999999e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  40.74 
 
 
652 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  28.42 
 
 
626 aa  222  1.9999999999999999e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0549  methyl-accepting chemotaxis sensory transducer  34.33 
 
 
640 aa  221  3e-56  Halorhodospira halophila SL1  Bacteria  normal  0.43692  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
645 aa  221  3.9999999999999997e-56  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  41.48 
 
 
636 aa  221  3.9999999999999997e-56  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
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