Gene Tgr7_0712 details

Gene Information

• Locus tag: Tgr7_0712
• ID: 7318059
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 769244
• End bp: 771118
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643615592
• Product: putative methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002512791
• Protein GI: 220933892
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCTCA AGATGCGACT GACGTTGCTG GCCCTGGGTG CCCTGCTGTT TGCCTCCATC 
GCCCTGATCA GCACCGCCCG CATGGCCCAG AACGAGGCGG AGCAGCGTTT CGAATCACTG 
GTGATGAGCA GCAAATCCCA GCTCTGGGAG AAGATCATCC GTACCGAGAT GGAACGCATG 
CGCACCGGCA TGCAGGGCCT GACCCGGGAC CGCAACACCC TGGCGGCCAT GGCCTCCGGC 
GACCGCGCCG CCCTGGCCGA CAACGCCCGG CCCACCTTCA ACCGCCTGAG CGCCTCCGAG 
ACCATCTCCC GCCTGCAGCT CACCGACACC CGGGGCCAGA TCCTGTTCTC CGCCCCCGGC 
GAGTTCAGTG GCGAGACCCG CAAATCCCTG GTTGCACAGG CCCTCGAAGA ACGCGCCGTG 
GTACAGGGGG TCCAGCGGGA CGAGGACGGC ACCCTGGTCT CGGTGCTGGC CTTCCCCATG 
TACCAGCGCG GCCAGCTGGC GGGCGCCGGT GTATTCATGC GCACCCTGGA CACGGCCCTG 
GCCGACCTGT CTGCCGCCGA TGAATCCCAC AACTACGTGG TCAGCCCCCG TCAGGGCACG 
GAATACTCCA CCGACGAGGA CGAACAGTTC TATGGGAGCC TGGGCCTTGA GCTGCCGGCC 
CTGGGCAGCG AACTGGTCAC CCGGGCCCAC CACGACGGAT TCGGCTACTC GGTGTTGGTG 
CGCCCCATCA ACGCCCCGGA CGGCCAGCCC CTGGCCCACC TGGTGAGTGT CAACGACTTC 
ACCGAAAGCT TCTCTCAGCA ATCGCGCATC AATCTCATGG CCATCGTCAT CACCGTGGTG 
GTGATCCTGG TCCTGGGTCT GCTCATCTAC TGGTACACCC ACCGGGCCTT CGCCCCCCTG 
CTGGCCGCCG TGGACACCCT GGACGCCATC GCACAGGGCG ATCTGACCCA CGACCTGCCC 
GAAGTGAACC GGCGCGATGA GACCGGGCGC CTGATGACCG CCATGCGCAC CATGCTCCTG 
CGCCTGCGGG ACATGATCAA CGAGGTCAAT GCGGCCACCG GCCAGGTGGC GGCGGCGGCG 
GAACAGATGT CCGCCACCAC CCAGGAGACC AGTGCCGGCA TCCAGCGCCA GCGCAGTGAA 
ATCGAACTGC TGGCCACCGC CATGACCGAG ATGAGCCAGA CCACCCAGGA TGTGGCCCGC 
AACGCCAACG AGGCCGCCGA CTCAGCCAAC TCAGCCAAGG ACGAATCATC CAGCGGCGAG 
AAGGTCGTGC GCCAGACCAT CGGTGCCATC GAGGACCTGG CCAGTTCCGT GGAGGAGACC 
GCCCAGGTCA TTCACCGCCT GGAGAGCGAC ACCGACAACA TCCGCGTGGT GCTGGACGTG 
ATCCGCGGCA TCGCCGAACA GACCAACCTG CTGGCCCTCA ATGCCGCCAT CGAGGCGGCC 
CGGGCCGGCG AACAGGGCCG CGGCTTCGCC GTAGTGGCCG ACGAGGTGCG CACCCTGGCC 
ACCCGCACCC AGGATTCCAC CCAGGAGATC CAGCGCATCA TCGAACAGCT CCAGGGGGGT 
GCCGGGGAGG CGGTCAAGGC CATGGAAGGT GGACGCAGCA AGGCCCAGAA GACGGTGGAA 
GAGGCCGCCC TGGCCGGAGA ATCACTCACG CGGATCCGTG CCGCCGTGGA CACCATCACC 
GACATGAACC ACCAGATCGC CAGCGCCGCA GAGGAACAAA GCGCCGTGGC CGACAACATG 
AACCAGAGCG TGGTTACCAT CAACCACGTG GCCGAGGAGA CCAGCGCAGG CGCCCTGCAG 
ACCGCCAACG CCTCCGAAGA ACTGGCCCAG CTGGCCCTCA GGTTGCAGCA GCTCGCCGGA 
CATTTCCGCA CCTGA 

 

Protein sequence

MSLKMRLTLL ALGALLFASI ALISTARMAQ NEAEQRFESL VMSSKSQLWE KIIRTEMERM 
RTGMQGLTRD RNTLAAMASG DRAALADNAR PTFNRLSASE TISRLQLTDT RGQILFSAPG 
EFSGETRKSL VAQALEERAV VQGVQRDEDG TLVSVLAFPM YQRGQLAGAG VFMRTLDTAL 
ADLSAADESH NYVVSPRQGT EYSTDEDEQF YGSLGLELPA LGSELVTRAH HDGFGYSVLV 
RPINAPDGQP LAHLVSVNDF TESFSQQSRI NLMAIVITVV VILVLGLLIY WYTHRAFAPL 
LAAVDTLDAI AQGDLTHDLP EVNRRDETGR LMTAMRTMLL RLRDMINEVN AATGQVAAAA 
EQMSATTQET SAGIQRQRSE IELLATAMTE MSQTTQDVAR NANEAADSAN SAKDESSSGE 
KVVRQTIGAI EDLASSVEET AQVIHRLESD TDNIRVVLDV IRGIAEQTNL LALNAAIEAA 
RAGEQGRGFA VVADEVRTLA TRTQDSTQEI QRIIEQLQGG AGEAVKAMEG GRSKAQKTVE 
EAALAGESLT RIRAAVDTIT DMNHQIASAA EEQSAVADNM NQSVVTINHV AEETSAGALQ 
TANASEELAQ LALRLQQLAG HFRT