Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1940 |
Symbol | |
ID | 1043120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2193511 |
End bp | 2195661 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637145345 |
Product | methyl-accepting chemotaxis transducer |
Protein accession | NP_744092 |
Protein GI | 26988667 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000108039 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCGTTTA GTAAAATTTC GATCCAATTG AAAATCACTT TACTTGCCGG ACTTTGCTTG GTGGGCGTAG TTTCCCTACT TATGGGGCTT TCATTGTACC GAATAGAGCA CAACTCAGAT CTGGTCAAGT TCAGCAGTAT GAAAATGCTG TCAGATGCGG CGCAATCCCA CATCGAATCG CAAGGTGAAA TACAAACCTT GATCATCCGC CGTCAGTTCA CCGATGCCTA CCAGTACGGC AATGGCTTTT CGCGACATAT GCAGCAGCTT CTGCTAAACC AGGTGGAAAA TAGTCCATTT CAGCCATCTG CGTTTAGAGA AAGCATAGTC TTCCAAGCCA AGACAGTTTT ACAAGCAAAT CCGGGGCTGT TAGGGATTTC TTTGGTATTC GAGCCAAATG CACTTGATGG GAAAGATGAA ATATTTGTTG GTAATACCGC GCTAGGCAGT AATGACAAGG GAAGATTCGC TCTTAACTGG ACGCAGTCAA ACACAGGACA GATTACCTCA ATTGTCATTT CTGAAAACGA ACTAGATAGC GCGAAAAACG CTTCAAGCAT CAATCAAAAT GGTACGAGAA ATACGTGTTC ACGTAGCGCA CTCAAACCCT GCGTGTTTGA GCCGTTCTTC AGTCGGGTAA ACGGACAGAA AACATTAGTG ACAAGCATCG TTTTCCCCCT ACTTGTAGAC AATAAGCGGG TCGGTTCCCT ATTGGTAGAC ATTAGCCTAG ATGGCTTGCA ATCTGTGAGC CAAGATACCA GTAGGAAACT ATATGAAGGA CAGGCAGGCA TTAGCGTAAT TACTCCATCT GGGTTATTGG CTGGACATAG CCCCGATGTG CGGCTTGTTG GAAAATATCT TAACGCCATT GACAGTGACG ATGCCGCCGA ATTGGTTCGC CTGCTGAATA CTGAACCGGG CAAGCACAGC CTTAAGGGTG AAGCCAGGAT GAAGACCCTA GTTACGTTCG AGCCGATTCC TGACGACGCC CCCTGGGGAG TGCTGCTGGA TATACCTGAG AGCGTGTTAA TTGAGCCAGC AGAAGTACTA AGGAGGCAGC TGGACCAACG TAACACCACT GGTTCTCTTG TAGAGCTTGG ATTGGGATTG TTAGCCGCAA TCGTTGGCCT GCTATTTATA TGGATGATGG CACGTAGTGT TACTAAGCCA ATTCTTCGCG TTGCATATAT GCTGAGAGAC ATCGCTAGTG GCGACGGCAA TCTGACCCTC CGACTCGCCT ATGAGAAACA AGATGAGTTG GGCGAGTTGG TGGCATGGTT CAACTCCCTC CTTGATAAAC TACAGCCTAC TATCGCCGAG GTAAAACGCT CAGTCCAGGC TGCCCGAGCT ACGGCGGACG AGTCGGCAGC GATTGCTCGT CAAACCAGTA ACGGGATGGA GGAGCAATCT CGTCAAGTCC ATTTGGTGGT CACCGCATCT CAAGAAATGA ATGCGACTGC CCAAGATGTT GCGCGGAGTG CTGCGCAAGC TGCCAAAGCG GCGTGTGATG CCGACCAGGC TACACGCGAG GGATTGTCAG TGATCGGGCG CACGACTAGT AGCATAGATC ATTTAGCAGC AGATATGAGC GAGGCTATGA GTCAAGTGGA AAGCTTAGCA ACACATAGCG AGAAGATAGG AATGGTACTG GAGGTCATTC GTTCAATTGC CGAACAGACA AACCTACTAG CGCTCAACGC TGCTATCGAA GCTGCTCGCG CTGGTGAAGC AGGCCGTGGT TTTGCGGTGG TAGCTGATGA GGTACGCAAC CTAGCCCGAC GTACACAAGA ATCGGTAGAA GAAACAAGGA TAGTCATTGA ACACTTACAG AGTGGAACCG AGTCAGTAGT TACAGCGATG AGCAAGAGTC AGCGGTTGGC GAGTGGTAGT GTTGATCAGG TCAGCCAAGC TGTTACTGCT CTTAGCCAAA TTGGTGATGC GGTGACAGTC ATCACTAGCA TGAACCTGCA AATTGCCAGC GCAGCCGAAG AGCAAAATGC CGTTGCAGAG GAGATCAATT GCAACATCTC GATCATTCGC GATGTGACAG AGTCCATGTC AGATCGAGCG AGTGAATCTG CGCGGATAAG TGATTCCATA TACAAATTAG CCAATCAGCA GCAAGTTCTA ATGAACCAGT TCCGCGTATA A
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Protein sequence | MSFSKISIQL KITLLAGLCL VGVVSLLMGL SLYRIEHNSD LVKFSSMKML SDAAQSHIES QGEIQTLIIR RQFTDAYQYG NGFSRHMQQL LLNQVENSPF QPSAFRESIV FQAKTVLQAN PGLLGISLVF EPNALDGKDE IFVGNTALGS NDKGRFALNW TQSNTGQITS IVISENELDS AKNASSINQN GTRNTCSRSA LKPCVFEPFF SRVNGQKTLV TSIVFPLLVD NKRVGSLLVD ISLDGLQSVS QDTSRKLYEG QAGISVITPS GLLAGHSPDV RLVGKYLNAI DSDDAAELVR LLNTEPGKHS LKGEARMKTL VTFEPIPDDA PWGVLLDIPE SVLIEPAEVL RRQLDQRNTT GSLVELGLGL LAAIVGLLFI WMMARSVTKP ILRVAYMLRD IASGDGNLTL RLAYEKQDEL GELVAWFNSL LDKLQPTIAE VKRSVQAARA TADESAAIAR QTSNGMEEQS RQVHLVVTAS QEMNATAQDV ARSAAQAAKA ACDADQATRE GLSVIGRTTS SIDHLAADMS EAMSQVESLA THSEKIGMVL EVIRSIAEQT NLLALNAAIE AARAGEAGRG FAVVADEVRN LARRTQESVE ETRIVIEHLQ SGTESVVTAM SKSQRLASGS VDQVSQAVTA LSQIGDAVTV ITSMNLQIAS AAEEQNAVAE EINCNISIIR DVTESMSDRA SESARISDSI YKLANQQQVL MNQFRV
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