Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1059 |
Symbol | |
ID | 1182693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1154539 |
End bp | 1156428 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392438 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_790895 |
Protein GI | 28868276 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGG CCCTCGGGTT TGGTCTTGTA CTTGTTTTTA CTGCCATTCT TGCCCTGACC GGCTGGACCA GCATGACCAG TCTGATCAAT CGCAGCAACT GGATGAGCGA CATTACGTCA CTTAATTCAC AACTGACCAA ACTGCGGGTT GCCCGCCTGC AGTACATGGT GGCTGACGGC GACGAGAAAG TCGCAGAGGC CGTTCAGGTT TCGCTGGATG GCTTCAAGAA TTATCAGCAG AAGCTGCTGG CCACGTTCAA GAGCCCTGAG AACGTGAAAA TGCTCGAACA ATTGTCTGCG GTGATCGCTG ACTATCAGAA ATCGCTGAAT AATATGCGCA GCGGGTACAA GGCCAGCACT GCGGCGCGTG ATGAACTGAC CATGCATGCC GGCAAAAGTA TCGATGTGTT TGAGCTGCTT CAGGATGAAG TAAAAAAAAT GGACCCTGCC GATGCCAATC GGTTTGAGCA ATACCGGATC GTCACTGATG CAAAGGAAAA CCTGAGGCTC GCGCGTTATG AAGTGCGTGG CTACACCACC AATGCCACGC CCGAAACCGA GCAGGCAGCC GTGGCAAAAC TGGATCTGGC CATCAAGGAT CTGGACACGC TGAAAACAAC GTTCAGCAGC ACCCAGGCCG ATCAGCTCAG GCAACTGGAA ACCTCGCTGA TGGCCTACCG CACCACGCTG CAGAACTTCA AGGCCGCGAC TGCTAACATC GCTCTGGCTC GCCAGGAAAT GACGGTACAG GGCCAGGACA TCGTCAAAAT CAGCGAAGCC ATGTATCAGT TGCAACTGAA TCGCCGCGAT CAGGAAAGCG CGCAGGCCCG CACTACGCAG ATCACTTGCA CGCTGCTGGC CATCATTTTG GGCATGATCG CAGCCGTGAT CATCACCCGG CAGATTACCC GTCCATTGCA GGAAACCCTG GCAGTGGTCG ATCGCATTGC TTCCGGCGAC CTGACCCAGA CCCTGGCGGT CACTCGTCGT GACGAGCTGG GTGTGTTGCA GCAAGGTATT CAGCGCATGG GCAGCACGCT GCGTGAGCTG ATCGGCGGGA TTCGCGACAG TGTCGTACAG ATCGCCAGTG CCGCCGAAGA GCTATCGGCC GTTACCGAAC AGACCAGCGC CGGCGTCAAC AGCCAGAAAG TCGAAACCGA TCAGGTGGCC ACGGCCATGC ACGAGATGTC GGCCACGGTT GCAGAAGTGG CGCGTAACGC CGAGCAGGCC TCGCAGGCAG CGTCCAACGC CGACCGCGAA GCACGCGATG GCGACAAGGT GGTGGGCGAA GCGATTGCCC AGATCGAGCG TCTGGCCAAC GAAGTGGGTC GCTCGGCAGA CGCCATGGGC CTGCTGGAGC AGGAAAGCGA CAAGATCGGC AAGGTCATGG ATGTGATCAA GGCGGTGGCC GAACAAACCA ACCTGCTGGC CCTCAACGCC GCCATCGAGG CCGCGCGTGC CGGGGAAGCC GGGCGTGGCT TTGCCGTGGT TGCCGACGAA GTTCGTGGCC TGGCGCAGCG TACGCAGCAA TCCACCGTCG AGATCGAGAC GCTGGTTGCC GCCCTGCAAA GCGGCACGCG CCAAGTGTCC AGCATCATGC TGAGCAGCCG CGAACTGACC GTCAGCAGCG TACAGCTGAG CCGTCAGGCC GGTACGTCGC TGGGCAGCAT CACCCAGACA GTCTCCAACA TTCAGGCCAT GAACCAGCAA ATCGCCGCCG CTGCCGAGGA GCAGAGCGCC GTAGCCGAGG AAATCAGCCG CAGCATCGTC AACGTGCGCG ATGTGTCCGA GCAGACCGCC TCGGCCAGCG AGGAAACCGC TGCCTCCAGC GTCGAGCTGG CGCGCCTGGG CGGACAATTG CAGACGATGG TCAGCCACTT CCGGATCTGA
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Protein sequence | MKLALGFGLV LVFTAILALT GWTSMTSLIN RSNWMSDITS LNSQLTKLRV ARLQYMVADG DEKVAEAVQV SLDGFKNYQQ KLLATFKSPE NVKMLEQLSA VIADYQKSLN NMRSGYKAST AARDELTMHA GKSIDVFELL QDEVKKMDPA DANRFEQYRI VTDAKENLRL ARYEVRGYTT NATPETEQAA VAKLDLAIKD LDTLKTTFSS TQADQLRQLE TSLMAYRTTL QNFKAATANI ALARQEMTVQ GQDIVKISEA MYQLQLNRRD QESAQARTTQ ITCTLLAIIL GMIAAVIITR QITRPLQETL AVVDRIASGD LTQTLAVTRR DELGVLQQGI QRMGSTLREL IGGIRDSVVQ IASAAEELSA VTEQTSAGVN SQKVETDQVA TAMHEMSATV AEVARNAEQA SQAASNADRE ARDGDKVVGE AIAQIERLAN EVGRSADAMG LLEQESDKIG KVMDVIKAVA EQTNLLALNA AIEAARAGEA GRGFAVVADE VRGLAQRTQQ STVEIETLVA ALQSGTRQVS SIMLSSRELT VSSVQLSRQA GTSLGSITQT VSNIQAMNQQ IAAAAEEQSA VAEEISRSIV NVRDVSEQTA SASEETAASS VELARLGGQL QTMVSHFRI
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