Gene Pfl01_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4192 
Symbol 
ID3717593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4731305 
End bp4733269 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content61% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_349920 
Protein GI77460413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGG CCGTGCAAGG ACGTTTTGCC AACCTCGGTA TGGCAAAAAA ACTGGGTATC 
GGGTTTGTGT TGGTGTTGTT GCTGACTGCA CTGGTGGCGG CGATTGGCGT CTGGTCCCTG
CAAACCATCA GTCAGCGCTT CGACGGCCTC AAGCAGATGT CATCGCTCAA CAGTGGCTTG
CTCAAGGTGC GGCTGCTGGA GCAGGACTAC GCCTTGCACG GCAACCCGAA AACCGTCGAT
GCCTTGCACG AAGGTGTGGA CGGTCTGATT GCCATGGCCA ATGGGCTCAA GGCGCAATCC
TCGGCGAATG TGCCGGTGAT GAGCGACGTA GAACAGTCGC TGGTTGCCTA TCGCAAGGCG
TTTGATGAAT TCGTCTCGTT GTCCCAGGCC AAGGACCTGG CGCTGGAAAT GGCCAGTTGG
TCGGTGTCCA GCGTCGCCAA CAATCTCGAT GTGCTGCAGG CCGGTCTTGC CGATGACGGC
GCGTACACCC TGAAAGACAG CGAAGGCAAG GACGGGGCGC AATTCATCGA GCAGGCTGGC
CAGGTCAGCC AAGTCTCACG CTTGATGTTG CAGGCAATGA ACGAAGCACG GGTACGTCTG
GATCAAAGCC GCAAGGGTGA TGACAGTGCA GGTCAGGGCA ATATCGAGCA GGCTGCCCAA
GCTCAGGCCC AGGCCGAGCA GCTCAAATCC ACGGTCAAGG ACGAGGGTTA CCTGACGGTG
CTCAATGAAG TGTCCGGGCA CATTGCCGGT TTCAGCGACA AGCTTGCCGA GTACACCGGG
TTGCTGGCTC AGGAAAAGAC TGTCTATCAA CAGTTGCACC AGCGGGCCGA TGAAGTCGTG
GCGCGGGTCG ATCAGGCCTA TGTCGCGCAA GACGGCGCGA TGCAGGGCGA ACTGAAAAAG
AATTCGGTGC TGATCATTGG CTCGTCGGCG CTGGCGTTGC TGGTCGGGCT GATCGCGGCG
TGGGTGATCA CCCGACTGAT TGTGGCGCCG TTGCGCAGCG TGATTCATGT GGCGCAACAG
ATTGCGGCCG GTGATCTGAG TGCAACGATC GAGGTCACCC GGCGGGACGA AATCGGTCAG
TTGATGCTGG CCATGCAGCA GATGGGCGCG GGTTTGAGCA CGATTGTCAG CGGGTTGCAG
GCGGGGATCG AACAGTTGGC GAGTTCGGCG CAATCGCTGT CGGCGGTGAC CGAACAGACC
AACCTTGAGG TCAGCAGCCA GAAAGAGGAA ACCGAACAGG TCGCCACGGC CATGAACCAG
ATGACCGCCA CCGTTCACGA TGTGGCGCGC AATGCCGAAG AGGCGGCGCT CGCGGCGCAG
ACTGCCGATG GCAAGGTTGA AAGCGGTCAG CAGGTGGTGC GTCAGAGCAT GGCGCGGATC
GAGCAACTGG CGGATTCGGC GACGTCGGCC AGTTCGAGCA TCGAAAGCCT CAGTGCGGAA
ATCCAGAACA TCGGCACGGT GCTGGGTGTG ATCAAGAGTG TCGCCGAGCA GACCAACCTG
CTGGCGCTCA ACGCGGCGAT CGAAGCGGCG CGGGCGGGCG AGCAGGGCAG GGGCTTTGCG
GTGGTCGCCG ATGAAGTGCG GGCGCTGGCC CGGCGCACGC AGCAGTCGAC CGAGGAGATC
GAGCGGCTGG TCAGCGCCTT GCGCTCGGCG GCGCATTCGT CGGTGCAGCA GATTCAGAGC
AGTGGCGAAC TGGTGAAGCT GGCGGTAAGT GATGCGTTGC AGACCGAGAG TGCGTTGGGG
AGTATTGCGG CGGCGGTTTC GTTGATTCAG CAGATGAACC AGCAGATTGC GGCGGCGGCC
GAGGAGCAGA GTTCGGTGGC CGAGGAGATC AATCGCAGTG TGACGAGTAT TCGGGCGAGT
GCGGATCAGT CTTCGATTGC CATGCGGGGG AATGCGGCTT CGAGTGTTGA GCTGGCGCAG
TTGGGGAGTG AGTTGCGGGG GATGGTGGGG CACTTTCGGC TTTGA
 
Protein sequence
MISAVQGRFA NLGMAKKLGI GFVLVLLLTA LVAAIGVWSL QTISQRFDGL KQMSSLNSGL 
LKVRLLEQDY ALHGNPKTVD ALHEGVDGLI AMANGLKAQS SANVPVMSDV EQSLVAYRKA
FDEFVSLSQA KDLALEMASW SVSSVANNLD VLQAGLADDG AYTLKDSEGK DGAQFIEQAG
QVSQVSRLML QAMNEARVRL DQSRKGDDSA GQGNIEQAAQ AQAQAEQLKS TVKDEGYLTV
LNEVSGHIAG FSDKLAEYTG LLAQEKTVYQ QLHQRADEVV ARVDQAYVAQ DGAMQGELKK
NSVLIIGSSA LALLVGLIAA WVITRLIVAP LRSVIHVAQQ IAAGDLSATI EVTRRDEIGQ
LMLAMQQMGA GLSTIVSGLQ AGIEQLASSA QSLSAVTEQT NLEVSSQKEE TEQVATAMNQ
MTATVHDVAR NAEEAALAAQ TADGKVESGQ QVVRQSMARI EQLADSATSA SSSIESLSAE
IQNIGTVLGV IKSVAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRALA RRTQQSTEEI
ERLVSALRSA AHSSVQQIQS SGELVKLAVS DALQTESALG SIAAAVSLIQ QMNQQIAAAA
EEQSSVAEEI NRSVTSIRAS ADQSSIAMRG NAASSVELAQ LGSELRGMVG HFRL