Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1701 |
Symbol | |
ID | 5109675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1871430 |
End bp | 1873382 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502930 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001187197 |
Protein GI | 146306732 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.076135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC CTGCCGCACG TCTGTTCGCC AACCTTGCCG TTGGCAAGAA ACTCTTCATC GGCTTCGGTC TGGTATTGCT GCTCACCGCA GCCATGACCG GCAGCGGCTT TCTTGCCGTG CAAGCCGTGC TGCAGGGGCA CGCCCAGGTC GGCCAGCTGG CACAGGTCAA CCAGGAGATT CTCCAGGCCC GCCGCCTGGA ACGCAGTTTC GCCATCGAGC AGACCCCGCA GAGCGCCGAG CGCGTGCGGG CCAGCCTGCT TCAGGTGCAG GGACTGCTCG ACCAGCTCGC GCAGAACGGT TCGGGCGCCA GCTCGCGCAA TCAGACCATG CAGCAGGCCG TGGCCGAGTA CCTCAAGCAG TTCGACAACT ACGTCGAGCA GCAGGACAAG TCGCGCGAGG CGCGCCGCGA CATGCGCGCC GCCGCCGCGG AAACCCGCGA CCAGTTCGAG GTGATCGAAC TGGACATGTA CGACGCCGTG CGCGAGCTGC GTCTGCAGGG CGACCGCCTG CGTGGCAGCG ATCCGCTGAC CCTGGCCGAG ACCGCCTCCG GTCTGAGCAA GCGCATGCTC GACCTGCGTG GTCATGAAAG CCTGTACATC ATCGACGGTT CGGCCGAGGC GCTGGAGGAG TGGGAGTACG TCAGCGAAGA CCTGCAGACC GTGGCCCGCA GCCTGATGGT ATGGCTCAAC GACGACCAGA AGGGCGCCAT CGACACCGCC TTGCAGGCGC TGACCCTGTA CCAGCGCTCC TTCCTCTACT ACCAGCAGCT GCGTGAGCAG AACCAGGCGA CGGAAAACGC CATGATCGAA CGCGCGCGTT CCGTGGTGGA CCTGGCCGAA GCCGCCCAGG CTGCGGCCGA GCAGGGCATG CTCGACGACA GTCAACGCGC CTTGGTAATG CTCGGCATCA TGGGCGCCGC TGCGGTGGTG CTGGGCCTGT GCGCGGCCCT GCTGATCACC CGCCTGATCG TCGTGCCGCT GCGCCAGAGC GTCAGCTTCG CCCAGCGCAT CGCCAGTGGC GATCTGAGTC AGGACATTCC CCAGCAGCGC AGCGACGAGG TCGGCCAGTT GTTTGCCGCC ATGCAGGACA TGACCCTCAG CCTGCGCAAC CTGGTCGGCC GTATCGGTGG CGGCGTCGGG CAGATCGCCG CCGCTGCCGA GCAGCTGTCG GCTATCACCG CGCAGACCAG CGCCGGTGTG CAGACGCAGA AGCTGGAAAC CGAACAGACC GCCACCGCCA TGCACCAGAT GGCCGCCACC GTGCAGGAGG TGGCGCAGAA CGCCGAGCAG GCCTCGCTGG CCGCACGCGA CGCCGATCTG GAGGCGCAGC AGGGCAATCG CGTGGTGCAG CAGGCGGTGG ATCAGATCGA CAGCCTGGCC AGCGAGGTGG AGCAGTCGGC CGAGGCCATT GCTGCGCTGA ACCAGGAGAG CGCGCGTATC GGCAGCGTCC TGGAAGTGAT CCGCAACGTT GCCGAGCAGA CCAACCTGCT GGCGCTCAAC GCCGCCATCG AAGCCGCGCG GGCGGGCGAG CAGGGCCGCG GCTTCGCCGT GGTCGCCGAC GAGGTGCGGG CGCTGGCCAA GCGGGCCCAG GACAGCACCG AAGAGATCGA GAGCCTGATT GCCGGTCTGC AGCGCATGGC CAAGGGCGCC GTGCAGCAGA TGGACAGCAG CCGCGAGCTG ACCCGGCGCA CCGTCGAGCT GGCGGGCGAG GCGGGCGACG CCCTGGGTCG CATCACGCAG GCGGTGAGCA CCATCGAGCA GATGAACCAG CAGATCGCCG CCGCCGCCGA GGAGCAGAGC GCGGTGGCCG AGGCGATCAA TGAAAGCGTG ACCCGCGTGC GCGACATCGG CGAGCAGAGC GCCGCCGCCA CCGAGCAGAC CGCCGCCTCC AGCGCCGAAC TGGCGCGCCT GGGCGGGGAG CTGCAGGAGC TGGTGCGGCA GTTCCGCACG TAG
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Protein sequence | MFEPAARLFA NLAVGKKLFI GFGLVLLLTA AMTGSGFLAV QAVLQGHAQV GQLAQVNQEI LQARRLERSF AIEQTPQSAE RVRASLLQVQ GLLDQLAQNG SGASSRNQTM QQAVAEYLKQ FDNYVEQQDK SREARRDMRA AAAETRDQFE VIELDMYDAV RELRLQGDRL RGSDPLTLAE TASGLSKRML DLRGHESLYI IDGSAEALEE WEYVSEDLQT VARSLMVWLN DDQKGAIDTA LQALTLYQRS FLYYQQLREQ NQATENAMIE RARSVVDLAE AAQAAAEQGM LDDSQRALVM LGIMGAAAVV LGLCAALLIT RLIVVPLRQS VSFAQRIASG DLSQDIPQQR SDEVGQLFAA MQDMTLSLRN LVGRIGGGVG QIAAAAEQLS AITAQTSAGV QTQKLETEQT ATAMHQMAAT VQEVAQNAEQ ASLAARDADL EAQQGNRVVQ QAVDQIDSLA SEVEQSAEAI AALNQESARI GSVLEVIRNV AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRALAKRAQ DSTEEIESLI AGLQRMAKGA VQQMDSSREL TRRTVELAGE AGDALGRITQ AVSTIEQMNQ QIAAAAEEQS AVAEAINESV TRVRDIGEQS AAATEQTAAS SAELARLGGE LQELVRQFRT
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