Gene VIBHAR_02788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_02788 
Symbol 
ID5556400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp2815538 
End bp2817634 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content48% 
IMG OID640908270 
Producthypothetical protein 
Protein accessionYP_001445969 
Protein GI156975062 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACA GTATACGTAC TCGAATCGCA GTCAGTGCGG GCGGTGCAAT GGCGTTCACT 
TTATTGATTG CAATGGGTAT GACTACCGAT GCATTTACTG ACGTGAACAA GCAAGTGAAC
GAGAAAGTAA AAGCGCAATT AACGGATGCG ACCAGTACCG ATCTGCAAAA CACCGCGATT
CAGCAAGGTC TGAATATTGC GAACCAGCTT GATCCTGTAC TTGCAAACTT GAAGCAAGTA
CGTTCGATCA TCGAGTTGAG CTCAGAAACT AACGCAAGTG CAGACCTTAT TGTTAAACAG
TTTACTGCCG CGCTAGAAGC ACAAAACAAA GCGGTATTTG CAGGCTACAT GGTTTGGCAA
GATAAAACTT GGCCACAGCA AGTGACGCTT AATCCTGAAG ACGGTTTTAA CAGCCAAGGT
TACCTTGCGC CTTTCTTCTC GCCAAATGAT CAAAACAGTT TTGATGCAGT GGCGATGGAA
AGTTTTAGCA ATACAGAGCT AAACAGCAGT GGCGAACGCA AAGACGATTG GCACTTAATG
CCTTACGAAA CGGGCAAAAC TTTCGTCATG GAGCCGTACT TTTATCCTGT ACGAGGCAAG
CAAGAGCTGA TTACAACCAT CAGCCAACCG ATAAAACAAG ATGGCAAGAT CATCGGTTCG
CTTGGTTTTG ATTTGTCTCT GTATGAACTG CAAAACCAGA GTGAACAATC GGCGCGTAAC
TTGTTTGATG GCAAGGGTAA AATTCTTATC ACCTCTTGGA AAGGTATTAC CTTGGCAAAC
AGCCGAGATG GTGCAATGGT GGGTAAGAAA GTTTCTTCAG AGCTGGCTGC CGAGTGGTCG
AACATTCAGT CGGTTGCGAA GCGCGATGGT GCTGGCCTTA TCGCTTTTGA TGGTGATGAG
TATGCGATCA CTGCTATCGA TACCAGTGAT GCGCCATGGG TAGTCATGGT GTCGGTTCCC
AGTAGTCACC TCACAAAAAG CGTCGACGAG TACCAGCAAT GGAGTGATGG GCAGAGTTCG
GAAGCGCTTG AAAAAGGTGT GTGGGCGGGG ATCTTCGCTG CTATTTTAGG CATTGCCGCG
ATGGCATTCA TTGCAAACTC GCTTGGCAAA GTGTTGAACA ACTTGGTTGA ACGTTTTAAA
GACGCGGCGC AAGGCGAGGG CGATCTGACT TACCGTATTG AAGTGAAAGG TAAAGATGAA
ACCGCGCAAC TGGCACATTG GTTCAATACC TTCTTGTCGC GTATGCAAGA GATGCTATTG
ACCGTAATGG CAACCGCAGA TCAAGTGGAT AAGAACGCAA CAGAAGGCCA AACACGTGCT
GCGGCTTCTC GCGACCAATT AAATGCTCAG GTTAATGAAG TGAACTCGTT AGCAACGGCG
ATCAATGAAA TGAGTGCAAC CGCACAGGAA GTTGCGAACT CTGCGGTTCA AGCAGCCGCT
GCGGCAAGCC AAGTACAAAG CAATAGCCTG AACGGCATGA CGCGTATGGA TAACGCTGCG
AGTGCGGTGG ATAGCTTGGC AATGCAAGTC AACGATGCGC AGCAACAAAC GCAGAATCTG
GTGGATTCCA GCACGGCAAT TCAGGGCATT TTGAGTGAAA TTGGCGGTAT TGCTGAGCAA
ACCAACTTAC TGGCGCTTAA TGCGGCGATT GAAGCTGCAC GAGCAGGTGA GGCTGGCCGA
GGTTTCGCGG TGGTTGCTGA TGAGGTTCGT AACCTTGCAA ACCGTACACA AGGGTCGACG
GAAGAGATCC GCGCAATGCT GGCTCGACTA GAGCAAGAAA CGCAATCGAT CGTTGTGCTG
ATGGAGCAAA GCCAAAAACA AGCGACCGAT ACTAAGGGCG AGACGCAAGC GGCACATCTA
GCGCTGTCTG AAATCAACCA AGCAATTGAA GTCATCAACG ACATGAACAA CCAAATCGCT
TCGGCAGCAG AAGAGCAGAG CTCTGTATCG GAAGAGATCA ACCGTAATGT GGTGATCATC
AACGATACCG CAGTAGAGGT GATGGACACC ATGACGTCGT CAGTAGAGAT CAGTAACGAA
CTTACCGTAA AAGCGAGCGA TCTTCACGGT GAGCTGAGTA AGTTTAAGCT GTCTTAA
 
Protein sequence
MFNSIRTRIA VSAGGAMAFT LLIAMGMTTD AFTDVNKQVN EKVKAQLTDA TSTDLQNTAI 
QQGLNIANQL DPVLANLKQV RSIIELSSET NASADLIVKQ FTAALEAQNK AVFAGYMVWQ
DKTWPQQVTL NPEDGFNSQG YLAPFFSPND QNSFDAVAME SFSNTELNSS GERKDDWHLM
PYETGKTFVM EPYFYPVRGK QELITTISQP IKQDGKIIGS LGFDLSLYEL QNQSEQSARN
LFDGKGKILI TSWKGITLAN SRDGAMVGKK VSSELAAEWS NIQSVAKRDG AGLIAFDGDE
YAITAIDTSD APWVVMVSVP SSHLTKSVDE YQQWSDGQSS EALEKGVWAG IFAAILGIAA
MAFIANSLGK VLNNLVERFK DAAQGEGDLT YRIEVKGKDE TAQLAHWFNT FLSRMQEMLL
TVMATADQVD KNATEGQTRA AASRDQLNAQ VNEVNSLATA INEMSATAQE VANSAVQAAA
AASQVQSNSL NGMTRMDNAA SAVDSLAMQV NDAQQQTQNL VDSSTAIQGI LSEIGGIAEQ
TNLLALNAAI EAARAGEAGR GFAVVADEVR NLANRTQGST EEIRAMLARL EQETQSIVVL
MEQSQKQATD TKGETQAAHL ALSEINQAIE VINDMNNQIA SAAEEQSSVS EEINRNVVII
NDTAVEVMDT MTSSVEISNE LTVKASDLHG ELSKFKLS