| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2635 |
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| Symbol | |
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| ID | 4604882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3155682 |
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| End bp | 3157802 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782046 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928507 |
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| Protein GI | 119775767 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.993869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TTCCCCTGCG ACAAAAGCTA CTTTGGATGA CCTCGGCGCT GTTTCTGGCC
ACTGTGGCCA CCATGTCGAT TACCCTCTGG AGTACCCTCA ATAACAAAAC CGACGAGCTC
TTCGTTGAGG TCGACACAGC GCTGAATGAT GAAATACGAA CCAAATTGAC TGCCAGCGCC
GGGCGCTATG GTGAAAAGGT CGCGGCCTTT ATCAACGAGG CCTACCGTAT CCCCTATTCC
TTCAGTGCCA TGATGGAAAA CGATGCGCTG GTCGGACGGA TGAATCGTGA AACCGTTCAG
GATGCCGTGG GCGCTGTGCT GCAGAAAAAT CGCCAGATTT CCTCCATGTA TGCACAGTTC
GAACCCAATG GTTTCGATGG CCGAGACAGT GAATTTACGG CACCCGGTCT GATGCACTCG
GTTGAGGGCG TGGGAACGCT CGAGGTGTAC TTTTATCGCA ACGATGATGG CAGTCAGACC
CAGTCTCAGG TGGATGATGC CAATGAAAAA TACGCCGATA CCCTCAACGA ATTTGGTCTG
CGGGAAGCTG AGTGGTATCT GTGTGCCAAA GACACCCAAA AACCCTGCCT GATGGAGCCC
TATCTCTACG AAATCACCCC CGGCAACAAC ATGCTGATGA CTTCATTGAC CGTACCCATT
GTTCGGGGTG GCCGTTTTCG CGGTGTGGTC GGTGTGGATT TGAACCTGCC CGTGTTTCAA
AAAATGATTG AGGAATTGTC GGCAAGTCTC TATCAGGGCC AGGCCAAGGT GACCTTGCTG
TCCACCAAGG GGCTGATTGT GGCCGCGAGC CACTATGACA AAAAAGCCAG GCCGCTCGGA
GAGGCAATCG ACAAGTCTCT CGCCAACCAA ATTCTGGGTC TGGGCAAGGG AGATGGTTAC
CTGCTTAACG ACAGCAGCAT GATAGTGGCC TATCCCATCA ATATTCCGCT CTCTGGCAGT
CAGTGGCTGC TTGCTATCGA AGTGCCAAGG CAGATAGCGT TGGCCAGTGC TGAACAGGTT
GAGGGGAGCA TGCAGGCCAT GGCAGCCAGC CTGGGGCGCT TTGTGTTGCT GCTGGGTATT
GGTATTGCCG CTGTGGCTGT GATTCTTATC GCTCTTTTTA TTCGCAGCGT GGTGGCGCCT
ATCCAGCAAA TTCAGCAGCG GGTCAGTCAG TTGGCCAGTG CTGAGGGGGA TTTAACCCAA
AGCCTGAAAG TGGATGAACA CGCAGAGCTG ATTGCCCTGG GCAATGGGTT TAATGCGTTT
ATCGGTAAGC TTCACGGACT TATCAGTGAA TTGAAAAAGG TCGCAACAGA ATCCCGCAAT
GAAAGCCAGG CAACGGCCCG GATTGCCGAG GAAACCAAGC AAAGTGTTAA TCGGCAATAC
AGTGAAATCG AGAGTGTGGT GACCGCCGTT AATGAGATGA GCCATACCGC CCATGAAGTG
GCTAAGGCAT CTGAGCAAAC GGCCAGCGAG TCGGCCGCCA TGGCCTCGCA GGTTAAGGTG
AGTCAGGACA GTTTGACTCA GGCGGTTTCT CTTGTGAGCA CCATGTCCAA GGAGTCGCTG
CAAGCCAAGA TAGCGGTGGG CAAGGTGGCA GAAAGCAGCA CCAATATCAG CAAAATATTG
GAAGTGATCA GTGCCATTGC AGCCCAGACA AACCTGCTGG CGCTCAACGC GGCCATCGAA
GCGGCCCGCG CCGGAGAGCA GGGCAGGGGC TTTGCTGTGG TGGCCGATGA AGTGCGTTCA
CTTGCCTCCA AAACCCAGGC TTCCACCGAT GATATCAGTC GGCTTATCGA TGCGTTGGAA
CAGGAAGTGA AAGGGGCTTC CGGGATTATC GATAAAGGGG TCGGCCTTGC TGAGCAGGCG
GTGGCGCAAA CCGAGCAGGC GTTTGAGGCT CTGTCGGTGA TGGTGGCGGG TATCAATGAA
ATCTCCAATC AGGTGACCCA AATTGCCACG GCTGCGGAGG AACAAAGTGC CGTCACCGAA
GAGGTGAGCC GCAACATCAC GGGGATCTCA GACTCGGCGG CAGAGCTGAT GGATTTGGCC
GGTAAGGCGC GGGAGAGCAG TGAAAGCCTG GCCAAGTTGG TTGGCAGGCA GGAGAGTCAG
CTGGCCAAGC TGCGCACCTG A
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| Protein sequence | MKHLPLRQKL LWMTSALFLA TVATMSITLW STLNNKTDEL FVEVDTALND EIRTKLTASA
GRYGEKVAAF INEAYRIPYS FSAMMENDAL VGRMNRETVQ DAVGAVLQKN RQISSMYAQF
EPNGFDGRDS EFTAPGLMHS VEGVGTLEVY FYRNDDGSQT QSQVDDANEK YADTLNEFGL
REAEWYLCAK DTQKPCLMEP YLYEITPGNN MLMTSLTVPI VRGGRFRGVV GVDLNLPVFQ
KMIEELSASL YQGQAKVTLL STKGLIVAAS HYDKKARPLG EAIDKSLANQ ILGLGKGDGY
LLNDSSMIVA YPINIPLSGS QWLLAIEVPR QIALASAEQV EGSMQAMAAS LGRFVLLLGI
GIAAVAVILI ALFIRSVVAP IQQIQQRVSQ LASAEGDLTQ SLKVDEHAEL IALGNGFNAF
IGKLHGLISE LKKVATESRN ESQATARIAE ETKQSVNRQY SEIESVVTAV NEMSHTAHEV
AKASEQTASE SAAMASQVKV SQDSLTQAVS LVSTMSKESL QAKIAVGKVA ESSTNISKIL
EVISAIAAQT NLLALNAAIE AARAGEQGRG FAVVADEVRS LASKTQASTD DISRLIDALE
QEVKGASGII DKGVGLAEQA VAQTEQAFEA LSVMVAGINE ISNQVTQIAT AAEEQSAVTE
EVSRNITGIS DSAAELMDLA GKARESSESL AKLVGRQESQ LAKLRT
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